RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 AGTR1P30556 359 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 OTX1P32242 354 aaPredicted RBP8.65□□□□□ -1.02
MSH2-202ENST00000406134 NTF4P34130 210 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 ALDH3B1P43353 468 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 EMP2P54851 167 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 HGFACQ04756 655 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 FGL1Q08830 312 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 SPEM2Q0P670 501 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 ATXN7L3Q14CW9 347 aaPredicted RBP8.65□□□□□ -1.02
MSH2-202ENST00000406134 TAF13Q15543 124 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 ABHD12BQ7Z5M8 362 aaPredicted RBP8.65□□□□□ -1.02
MSH2-202ENST00000406134 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.65□□□□□ -1.02
MSH2-202ENST00000406134 UEVLDQ8IX04 471 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 TMEM185AQ8NFB2 350 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 SLC22A8Q8TCC7 542 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 PHYHIPLQ96FC7 376 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 V9GYS6 101 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 ADAP1O75689 374 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 ACTL6AO96019 429 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 QDPRP09417 244 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 CD79AP11912 226 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 SERPINF1P36955 418 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 DAZAP2Q15038 168 aaPredicted RBP8.65□□□□□ -1.03
MSH2-202ENST00000406134 TMEM123Q8N131 208 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 CHST4Q8NCG5 386 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 OR1S2Q8NGQ3 325 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 TMEM54Q969K7 222 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 OR10C1Q96KK4 312 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 ZNF416Q9BWM5 594 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 NMES1Q9C002 83 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 LIME1Q9H400 295 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 OR5AC2Q9NZP5 309 aa8.65□□□□□ -1.03
MSH2-202ENST00000406134 KMT2EQ8IZD2 1858 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 TEX13DA0A0J9YY54 714 aaPredicted RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 NUPL2O15504 423 aaKnown RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 IGHG1P01857 330 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 HPNP05981 417 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 UMODP07911 640 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 PGAM2P15259 253 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 AKR1C4P17516 323 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 PRKXP51817 358 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 CLRN1P58418 232 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 GABREP78334 506 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 C10orf91Q5T1B1 145 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 CLEC18BQ6UXF7 455 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 Q6ZPA2 131 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 PGAP1Q75T13 922 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 OR4K15Q8NH41 348 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 RHBDD1Q8TEB9 315 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 OR5B2Q96R09 309 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 OCIAD1Q9NX40 245 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 CFAP47Q6ZTR5 3102 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 FAM25EA8MYX2 175 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 PRF1P14222 555 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 PNLIPP16233 465 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 TBPP20226 339 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 MSX1P28360 303 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 ZNF41P51814 821 aaPredicted RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 ARHGDIBP52566 201 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 DCDP81605 110 aaKnown RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 FIP1L1Q6UN15 594 aaKnown RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 UNQ6126/PRO20091Q6UXV3 157 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 SLC16A14Q7RTX9 510 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 TDHQ8IZJ6 230 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 OR4A4PQ8NGN8 299 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 SPACA9Q96E40 222 aaPredicted RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 CCDC74BQ96LY2 380 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 OXGR1Q96P68 337 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 PHB2Q99623 299 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 ACKR4Q9NPB9 350 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
MSH2-202ENST00000406134 CSAG2Q9Y5P2 127 aa8.64□□□□□ -1.03
MSH2-202ENST00000406134 GSTP1P09211 210 aaKnown RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 PI3P19957 117 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 SNTB1Q13884 538 aaKnown RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 PNLIPRP3Q17RR3 467 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 C10orf128Q5T292 105 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 DRAM2Q6UX65 266 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 ZIC4Q8N9L1 334 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 SLC30A7Q8NEW0 376 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 TERB2Q8NHR7 220 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 FAM71F1Q96KD3 344 aaPredicted RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 ZNF385AQ96PM9 386 aaKnown RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 MCTS1Q9ULC4 181 aaKnown RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 PCDHB10Q9UN67 800 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 LOC102723996A0A087X1L8 192 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 MASP2O00187 686 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 TOR1AO14656 332 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 H2AFB1P0C5Y9 115 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 SFTPDP35247 375 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 NPY4RP50391 375 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 PAN3Q58A45 887 aaKnown RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 FAM57BQ71RH2 274 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 CASTOR1Q8WTX7 329 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 SEC61A2Q9H9S3 476 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 OR5H15A6NDH6 313 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 SFT2D2O95562 160 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 MPIG6BO95866 241 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms