RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 UBTD1Q9HAC8 227 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 MPC1Q9Y5U8 109 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 SPTAN1Q13813 2472 aaKnown RBP10.51□□□□□ -0.73
LINC00339-201ENST00000404210 PLCE1Q9P212 2302 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 TRBV5-7A0A0A0MS05 114 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 A0A1W2PPW3 197 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 GMDSO60547 372 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 LMX1BO60663 402 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 GPX5O75715 221 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 RGS9O75916 674 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-201ENST00000404210 ALX3O95076 343 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 BMP4P12644 408 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 FAHP16930 419 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 ZNF20P17024 532 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 TGFBR2P37173 567 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 CRYBB2P43320 205 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 SOX2P48431 317 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 FABP5Q01469 135 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 NKPD1Q17RQ9 610 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 ZMAT1Q5H9K5 638 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 CLVS2Q5SYC1 327 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 GDPGP1Q6ZNW5 385 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 GPR141Q7Z602 305 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 CEACAM19Q7Z692 300 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 SPERTQ8NA61 448 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 OR5D14Q8NGL3 314 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 OR13C5Q8NGS8 318 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 TMEM106AQ96A25 262 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 ADAT3Q96EY9 351 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-201ENST00000404210 DIRC2Q96SL1 478 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 TRAF4Q9BUZ4 470 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-201ENST00000404210 PLEKHA1Q9HB21 404 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 ABCB9Q9NP78 766 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 ZDHHC8Q9ULC8 765 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 STUB1Q9UNE7 303 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 SSR3Q9UNL2 185 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 NOP16Q9Y3C1 178 aaKnown RBP10.51□□□□□ -0.73
LINC00339-201ENST00000404210 RHBDD3Q9Y3P4 386 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 PMF1-BGLAPU3KQ54 211 aa10.51□□□□□ -0.73
LINC00339-201ENST00000404210 DSCAMO60469 2012 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 PLSCR5A0PG75 271 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 A6NIN4 97 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 ZNF850A8MQ14 1090 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 M0R233 179 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 GABRPO00591 440 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 LILRA1O75019 489 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 NRASP01111 189 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 SOD3P08294 240 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 ADH4P08319 380 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 FGF9P31371 208 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-201ENST00000404210 GNALP38405 381 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 SNRPD2P62316 118 aaKnown RBP10.5□□□□□ -0.73
LINC00339-201ENST00000404210 TIMM50Q3ZCQ8 353 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 ZNF787Q6DD87 383 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 HIST2H2BCQ6DN03 193 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 C11orf71Q6IPW1 123 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 Q6ZR03 302 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 MOB3CQ70IA8 216 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 UTS2BQ765I0 119 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 BHLHE23Q8NDY6 225 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 TECTBQ96PL2 329 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 DERL3Q96Q80 235 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 OR14A2Q96R54 314 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 CHST5Q9GZS9 411 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 ZCCHC4Q9H5U6 513 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 MSL2Q9HCI7 577 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 NOX4Q9NPH5 578 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 FOXJ3Q9UPW0 622 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 ADGRG4Q8IZF6 3080 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 ROS1P08922 2347 aa10.5□□□□□ -0.73
LINC00339-201ENST00000404210 ANKRD61A6NGH8 418 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 C17orf100A8MU93 164 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 PIN1P1O15428 100 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 UCHL1P09936 223 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 IGFBP3P17936 291 aaPredicted RBP10.49□□□□□ -0.73
LINC00339-201ENST00000404210 ATF1P18846 271 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 CA6P23280 308 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 GADD45AP24522 165 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 ALDH3B1P43353 468 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 PPOXP50336 477 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 ZNF81P51508 661 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 MZT1Q08AG7 82 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 PRDX4Q13162 271 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 BLMHQ13867 455 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 OR8G1Q15617 311 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 CEACAM21Q3KPI0 293 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 ZNF529Q6P280 563 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 ANKRD13BQ86YJ7 626 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 OR5A2Q8NGI9 324 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 IGFBPL1Q8WX77 278 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 FUNDC2Q9BWH2 189 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 PAPOLGQ9BWT3 736 aaKnown RBP10.49□□□□□ -0.73
LINC00339-201ENST00000404210 OR51E2Q9H255 320 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 NEK6Q9HC98 313 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 NKIRAS2Q9NYR9 191 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 LAMP3Q9UQV4 416 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 GSTK1Q9Y2Q3 226 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 LRRK2Q5S007 2527 aa10.49□□□□□ -0.73
LINC00339-201ENST00000404210 ARFGEF3Q5TH69 2177 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms