RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 GPX8Q8TED1 209 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 MARC2Q969Z3 335 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 SMOC1Q9H4F8 434 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 ANGPTL7O43827 346 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 BTN1A1Q13410 526 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR10D3Q8NH80 312 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 HEYLQ9NQ87 328 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 DTX4Q9Y2E6 619 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 TEX51A0A1B0GUA7 166 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 EPOPA6NHQ4 379 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 LIPT2A6NK58 231 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 AQP8O94778 261 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 ADRA2CP18825 462 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 MRPS34P82930 218 aaKnown RBP12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 SPEM2Q0P670 501 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 HMGN3Q15651 99 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 KISS1Q15726 138 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR2A2Q6IF42 318 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF416Q9BWM5 594 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 BIN3Q9NQY0 253 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 IGHV5-10-1A0A0J9YXX1 117 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 A8MXE2 369 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 CYB5BO43169 146 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 ALX3O95076 343 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF674Q2M3X9 581 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR1S2Q8NGQ3 325 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 R4GN57 208 aa12.7□□□□□ -0.38
PCDHGA11-201ENST00000398587 WDR1O75083 606 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 JTBO76095 146 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 SPTBP11277 2137 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 PTHLHP12272 177 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 RPA2P15927 270 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF32P17041 273 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF766Q5HY98 468 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF770Q6IQ21 691 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 RBMS3Q6XE24 437 aaKnown RBP12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 GLDNQ6ZMI3 551 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 FBXL14Q8N1E6 418 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 ASB10Q8WXI3 467 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 HAS2Q92819 552 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 ABHD1Q96SE0 405 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 TINAGL1Q9GZM7 467 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 CHST6Q9GZX3 395 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 HIPK2Q9H2X6 1198 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 SLC39A9Q9NUM3 307 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 GFOD1Q9NXC2 390 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 TCFL5Q9UL49 500 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 GVINP1Q7Z2Y8 2422 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 MEIKINA0A087WXM9 373 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 SIRPB1O00241 398 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 FUT3P21217 361 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 GLRA1P23415 457 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 SNTB1Q13884 538 aaKnown RBP12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 ETFDHQ16134 617 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 C9orf40Q8IXQ3 194 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR2AE1Q8NHA4 323 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 TCTEX1D2Q8WW35 142 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 RTN4IP1Q8WWV3 396 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 MALSU1Q96EH3 234 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 PIGMQ9H3S5 423 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 TAF9BQ9HBM6 251 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 LCTP09848 1927 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 hCG_1809904A0A1W2PP81 198 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 A0A1W2PPE2 198 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 A0A1W2PR64 198 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 A0A1W2PRV1 198 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 TERTO14746 1132 aaKnown RBP12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 CTAG2O75638 210 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 MPZL1O95297 269 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 RAB11AP62491 216 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 TMEM128Q5BJH2 165 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 CDC20BQ86Y33 519 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 HPP00738 406 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 WNT1P04628 370 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 IFI6P09912 130 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 BAMBIQ13145 260 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR4S1Q8NGB4 309 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 S100PBPQ96BU1 408 aa12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZC3HAV1LQ96H79 300 aaKnown RBP12.69□□□□□ -0.38
PCDHGA11-201ENST00000398587 IGHV3-64DA0A0J9YX35 117 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 TMEM272A0A1B0GTI8 110 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 SHOXO15266 292 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 SEMG1P04279 462 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 PNLIPP16233 465 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 HOXA1P49639 335 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 FABP6P51161 128 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 GSG1Q2KHT4 349 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 TSEN54Q7Z6J9 526 aaKnown RBP12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 CRIPAKQ8N1N5 446 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF680Q8NEM1 530 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 H1FXQ92522 213 aaKnown RBP12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF501Q96CX3 271 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 BOD1Q96IK1 185 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 C2orf50Q96LR7 162 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 MARVELD1Q9BSK0 173 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 RALGAPA2Q2PPJ7 1873 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 SPRY1O43609 319 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 PTP4A3O75365 173 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms