RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 A0A1B0GV50 99 aa13.66□□□□□ -0.22
LSS-202ENST00000397728 ZNF92Q03936 586 aa13.66□□□□□ -0.22
LSS-202ENST00000397728 GPR157Q5UAW9 335 aa13.66□□□□□ -0.22
LSS-202ENST00000397728 DEGS2Q6QHC5 323 aa13.66□□□□□ -0.22
LSS-202ENST00000397728 RANBP3Q9H6Z4 567 aaPredicted RBP13.66□□□□□ -0.22
LSS-202ENST00000397728 PLEKHA3Q9HB20 300 aa13.66□□□□□ -0.22
LSS-202ENST00000397728 GHRLQ9UBU3 117 aa13.66□□□□□ -0.22
LSS-202ENST00000397728 HSD17B6O14756 317 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 TFP02787 698 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 CSF3P09919 207 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 OR10A3P58181 314 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 RBMS2Q15434 407 aaKnown RBP13.65□□□□□ -0.22
LSS-202ENST00000397728 C2orf76Q3KRA6 126 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 OSR2Q8N2R0 312 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 OR4A16Q8NH70 328 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 TCTEX1D2Q8WW35 142 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 PIK3IP1Q96FE7 263 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
LSS-202ENST00000397728 C3orf80F5H4A9 247 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 F5H5P2 479 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 JUNBP17275 347 aaPredicted RBP13.65□□□□□ -0.22
LSS-202ENST00000397728 GP2P55259 537 aaKnown RBP13.65□□□□□ -0.22
LSS-202ENST00000397728 ZNF616Q08AN1 781 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 TPBGQ13641 420 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 CD300LDQ6UXZ3 194 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 CREB3L2Q70SY1 520 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 GABRG1Q8N1C3 465 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 S100PBPQ96BU1 408 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 PELI1Q96FA3 418 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 IFITM5A6NNB3 132 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 AIPO00170 330 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 TERTO14746 1132 aaKnown RBP13.65□□□□□ -0.22
LSS-202ENST00000397728 PHF1O43189 567 aaPredicted RBP13.65□□□□□ -0.22
LSS-202ENST00000397728 BGLAPP02818 100 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 GLI4P10075 376 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 PRDX4Q13162 271 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 HACD4Q5VWC8 232 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 CCDC28AQ8IWP9 274 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 OR51J1Q9H342 316 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 AKAP6Q13023 2319 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 A0A0B4J203 849 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 RPL19P84098 196 aaKnown RBP13.65□□□□□ -0.22
LSS-202ENST00000397728 MAFIPQ8WZ33 124 aa13.65□□□□□ -0.22
LSS-202ENST00000397728 COL4A6Q14031 1691 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 VWA8A3KMH1 1905 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 DHRS3O75911 302 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 S100A6P06703 90 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 PRSS35Q8N3Z0 413 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 SPSB1Q96BD6 273 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 OPN3Q9H1Y3 402 aaPredicted RBP13.64□□□□□ -0.23
LSS-202ENST00000397728 ISYNA1Q9NPH2 558 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 TNFSF12O43508 249 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 PSMB1P20618 241 aaKnown RBP13.64□□□□□ -0.23
LSS-202ENST00000397728 TIPARPQ7Z3E1 657 aaKnown RBP13.64□□□□□ -0.23
LSS-202ENST00000397728 OR2B2Q9GZK3 357 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 ANK1P16157 1881 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 ARPC5O15511 151 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 FADS1O60427 444 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 PDCD1Q15116 288 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 NUDCD2Q8WVJ2 157 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 PLPPR2Q96GM1 343 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 MDC1Q14676 2089 aaKnown RBP13.64□□□□□ -0.23
LSS-202ENST00000397728 ZFPL1O95159 310 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 FAM76BQ5HYJ3 339 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 CMTM4Q8IZR5 234 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 RAB1CQ92928 201 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 SLC25A46Q96AG3 418 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 SDSLQ96GA7 329 aa13.64□□□□□ -0.23
LSS-202ENST00000397728 ANKRD34BA5PLL1 514 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 GPR137BO60478 399 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 OR2AK2Q8NG84 335 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 S1PR3Q99500 378 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 ADGRL4Q9HBW9 690 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 C1orf123Q9NWV4 160 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 SFRP5Q5T4F7 317 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 LRRC29Q8WV35 223 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 RIMS4Q9H426 269 aaPredicted RBP13.63□□□□□ -0.23
LSS-202ENST00000397728 TRGV10A0A0A0MS01 117 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 UPK3AO75631 287 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 CTXN2P0C2S0 81 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 GPR12P47775 334 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 TAS2R20P59543 309 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 LSM6P62312 80 aaKnown RBP13.63□□□□□ -0.23
LSS-202ENST00000397728 RNLSQ5VYX0 342 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 TREM2Q9NZC2 230 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 DEFA4P12838 97 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 ERP29P30040 261 aaKnown RBP13.63□□□□□ -0.23
LSS-202ENST00000397728 HOXA1P49639 335 aaPredicted RBP13.63□□□□□ -0.23
LSS-202ENST00000397728 ZFP36L1Q07352 338 aaKnown RBP13.63□□□□□ -0.23
LSS-202ENST00000397728 OR2B11Q5JQS5 317 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 C6orf183Q5T699 404 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 SIAH3Q8IW03 269 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 APCDD1LQ8NCL9 501 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 TMEM171Q8WVE6 324 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 CTHRC1Q96CG8 243 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 MSI2Q96DH6 328 aaKnown RBP13.63□□□□□ -0.23
LSS-202ENST00000397728 ZNF285Q96NJ3 590 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 PLEKHF2Q9H8W4 249 aa13.63□□□□□ -0.23
LSS-202ENST00000397728 SDCBPO00560 298 aaPredicted RBP13.62□□□□□ -0.23
LSS-202ENST00000397728 IFNA10P01566 189 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms