RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ICAM5Q9UMF0 924 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 B9D1Q9UPM9 204 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 TMED3Q9Y3Q3 217 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 BOD1L1Q8NFC6 3051 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SPENQ96T58 3664 aaKnown RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 SMCO3A2RU48 225 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FITM1A5D6W6 292 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 M0QYG6 137 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 PHOX2AO14813 284 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 KCNAB3O43448 404 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR2C1O95371 312 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CD3DP04234 171 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 MELTFP08582 738 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FCGR3AP08637 254 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 HKR1P10072 659 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 DRD1P21728 446 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 MAS1LP35410 378 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 LTBRP36941 435 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ARRB1P49407 418 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZNF84P51523 738 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SLC37A1P57057 533 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SPOCK1Q08629 439 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZNF141Q15928 474 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZNF674Q2M3X9 581 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 WDR38Q5JTN6 314 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 EXOSC6Q5RKV6 272 aaKnown RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 AKR1C8PQ5T2L2 129 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 STEAP1BQ6NZ63 245 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZNF585AQ6P3V2 769 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 HEPN1Q6WQI6 88 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZNF574Q6ZN55 896 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 DNM1P46Q6ZS02 220 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 BIVMQ86UB2 503 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FAM219AQ8IW50 185 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 DND1Q8IYX4 353 aaKnown RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 GPR137CQ8N3F9 429 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 JAGN1Q8N5M9 183 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR51A2Q8NGJ7 313 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SLC2A12Q8TD20 617 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SECTM1Q8WVN6 248 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 RNF166Q96A37 237 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 SPACA5Q96QH8 159 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 HS3ST6Q96QI5 342 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 C20orf24Q9BUV8 137 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 DDA1Q9BW61 102 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 TBL1XR1Q9BZK7 514 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 RIMS4Q9H426 269 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 PDE7BQ9NP56 450 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CENPMQ9NSP4 180 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 MSRAQ9UJ68 235 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 DCHS1Q96JQ0 3298 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FAM186AA6NE01 2351 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 LOC101059948A0A1B0GTJ6 334 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 A0A1W2PPE2 198 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 C9JQL5 133 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 RPL36A-HNRNPH2H7BZ11 118 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 DLEU1O43261 78 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 XRCC3O43542 346 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 DKK1O94907 266 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 PTBP3O95758 552 aaKnown RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 HLA-AP01891 365 aaKnown RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 POU2F2P09086 479 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 TACSTD2P09758 323 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FABP4P15090 132 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 MPZP25189 248 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 HTR2CP28335 458 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 MFGE8Q08431 387 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 DHRS2Q13268 280 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CLN3Q13286 438 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ACKR1Q16570 336 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 C14orf28Q4W4Y0 310 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 KHDC3LQ587J8 217 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 HLA-DQA1Q5Y7H0 255 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZNF529Q6P280 563 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ATG4DQ86TL0 474 aaPredicted RBP4.48□□□□□ -1.69
SSR1-202ENST00000397511 ZNF595Q8IYB9 648 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 HIST3H2BBQ8N257 126 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR4S1Q8NGB4 309 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 OR10AD1Q8NGE0 317 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ADAMTS17Q8TE56 1095 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 ASB17Q8WXJ9 295 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CCDC74AQ96AQ1 378 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FAM131CQ96AQ9 280 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 GALNT14Q96FL9 552 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 INTS14Q96SY0 518 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CDC6Q99741 560 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 NUDT9Q9BW91 350 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 KRTAP3-3Q9BYR6 98 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 KRTAP3-2Q9BYR7 98 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 COMMD4Q9H0A8 199 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 SPACA1Q9HBV2 294 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CRLF2Q9HC73 371 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 MED29Q9NX70 200 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FBXO4Q9UKT5 387 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 MMP17Q9ULZ9 603 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 CSAG2Q9Y5P2 127 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 FLVCR1Q9Y5Y0 555 aa4.48□□□□□ -1.69
SSR1-202ENST00000397511 TNRC18O15417 2968 aaPredicted RBP4.47□□□□□ -1.69
SSR1-202ENST00000397511 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.47□□□□□ -1.69
SSR1-202ENST00000397511 FAM157AC9JC47 383 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms