RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 DUX4L2P0CJ85 424 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 DUX4L3P0CJ86 424 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 DUX4L4P0CJ87 422 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 DUX4L5P0CJ88 424 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 DUX4L6P0CJ89 424 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 DUX4L7P0CJ90 424 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 PHYHD1Q5SRE7 291 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 DCAF12Q5T6F0 453 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF813Q6ZN06 617 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 MAML2Q8IZL2 1156 aaPredicted RBP9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 PAQR8Q8TEZ7 354 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLC25A43Q8WUT9 341 aaPredicted RBP9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLC25A28Q96A46 364 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 BORCS8Q96FH0 119 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 THOC3Q96J01 351 aaKnown RBP9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 PARP12Q9H0J9 701 aaKnown RBP9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 DUX4Q9UBX2 424 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 HDGFL3Q9Y3E1 203 aa9.21□□□□□ -0.94
CPSF1P1-201ENST00000397477 PLSCR5A0PG75 271 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CD79AP11912 226 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CPN1P15169 458 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 GLRA1P23415 457 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 RRADP55042 308 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 PCOLCEQ15113 449 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 DEGS2Q6QHC5 323 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 MOB3CQ70IA8 216 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 DOK3Q7L591 496 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLC36A1Q7Z2H8 476 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR6X1Q8NH79 312 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 LINC00052Q96N35 136 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 PILRBQ9UKJ0 227 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 hCG_1807616A0A1W2PRN6 198 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CDC14BO60729 498 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZP4Q12836 540 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 MICBQ29980 383 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 ABCA11PQ4W5N1 156 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CLVS2Q5SYC1 327 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 TMEM200AQ86VY9 491 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 MCEMP1Q8IX19 187 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR9K2Q8NGE7 335 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR56B1Q8NGI3 324 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR13C8Q8NGS7 320 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF845Q96IR2 970 aaPredicted RBP9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 PIGQQ9BRB3 760 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLC6A15Q9H2J7 730 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 PPA2Q9H2U2 334 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF442Q9H7R0 627 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 C14orf166Q9Y224 244 aaKnown RBP9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 LSM5Q9Y4Y9 91 aaKnown RBP9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CSAG2Q9Y5P2 127 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CHCHD2Q9Y6H1 151 aaPredicted RBP9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 SPTA1P02549 2419 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 ROS1P08922 2347 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CER1O95813 267 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 BPNT1O95861 308 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 NR2C1P13056 603 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 RBMXP38159 391 aaKnown RBP9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CEACAM16Q2WEN9 425 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 CLLU1Q5K131 121 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 FDX2Q6P4F2 183 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 IL22RA1Q8N6P7 574 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 SLCO5A1Q9H2Y9 848 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 NXT1Q9UKK6 140 aaKnown RBP9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 LOXL2Q9Y4K0 774 aa9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 TPRP12270 2363 aaKnown RBP9.2□□□□□ -0.94
CPSF1P1-201ENST00000397477 AQP7P3A6NL99 342 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 TOX3O15405 576 aaPredicted RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 MTRF1O75570 445 aaKnown RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR7C1O76099 320 aaPredicted RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 GABRA1P14867 456 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 AGTR1P30556 359 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 AIMP2Q13155 320 aaKnown RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 EXT1Q16394 746 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 SP6Q3SY56 376 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF260Q3ZCT1 412 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 SPIN3Q5JUX0 258 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 RAB11FIP2Q7L804 512 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 PAQR4Q8N4S7 273 aaPredicted RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 ABHD3Q8WU67 409 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 OIT3Q8WWZ8 545 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 CCDC187A0A096LP49 1063 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 FBXO24O75426 580 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 RFPL3SP0C7P2 107 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 GRB2P62993 217 aaKnown RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 STK11Q15831 433 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 C3AR1Q16581 482 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 PHLDA2Q53GA4 152 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF585AQ6P3V2 769 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 PGAP1Q75T13 922 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 LYG2Q86SG7 212 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 RPS4Y2Q8TD47 263 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 C9orf170A2RU37 121 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 EIF1BO60739 113 aaKnown RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 UMODP07911 640 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 HIST1H1DP16402 221 aaKnown RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF32P17041 273 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 IGFBP3P17936 291 aaPredicted RBP9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 DUSP1P28562 367 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 PTGDSP41222 190 aa9.19□□□□□ -0.94
CPSF1P1-201ENST00000397477 PTGFRP43088 359 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms