RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 OR51D1Q8NGF3 324 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 LILRB4Q8NHJ6 448 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 DEDD2Q8WXF8 326 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 FAM3DQ96BQ1 224 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 MOV10Q9HCE1 1003 aaKnown RBP12.97□□□□□ -0.33
CAPN3-207ENST00000397200 ELOVL5Q9NYP7 299 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 ASH2LQ9UBL3 628 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 POLR1DQ9Y2S0 133 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 A0A096LPE4 126 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 A0A1B0GTI1 187 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 A0A1W2PPZ6 126 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 ANKRD20A5PA0PJZ0 165 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 NAP1L6A6NFF2 107 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 PYCARD-AS1I3L0S3 204 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 ZG16O60844 167 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 CCL1P22362 96 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 GABRA6Q16445 453 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 RNASE12Q5GAN4 147 aaKnown RBP12.96□□□□□ -0.33
CAPN3-207ENST00000397200 ELFN2Q5R3F8 820 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 SFRP5Q5T4F7 317 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 FAM27BQ5VT28 67 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 BHLHA15Q7RTS1 189 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-207ENST00000397200 BIVMQ86UB2 503 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 TCTE3Q8IZS6 198 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 LRRC18Q8N456 261 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 PLPP7Q8NBV4 271 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 C1orf162Q8NEQ5 155 aaPredicted RBP12.96□□□□□ -0.33
CAPN3-207ENST00000397200 OR51A2Q8NGJ7 313 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF416Q9BWM5 594 aa12.96□□□□□ -0.33
CAPN3-207ENST00000397200 TMEM272A0A1B0GTI8 110 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 GGT3PA6NGU5 568 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 LMX1BO60663 402 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 TCRBP04435 133 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 IL32P24001 234 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 HOXC12P31275 282 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 EFNB2P52799 333 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 AP3S2P59780 193 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 RRAS2P62070 204 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 GRB2P62993 217 aaKnown RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 ENDOGQ14249 297 aaKnown RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 TSC22D1Q15714 1073 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 C2orf76Q3KRA6 126 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 BTN2A1Q7KYR7 527 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 SLC16A14Q7RTX9 510 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 UBASH3BQ8TF42 649 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 FCAMRQ8WWV6 532 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 BCL2L2Q92843 193 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 PTX4Q96A99 478 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 FOXRED1Q96CU9 486 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 TRAF4Q9BUZ4 470 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 NEK6Q9HC98 313 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 N6AMT1Q9Y5N5 214 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 CST2P09228 141 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 PSMB1P20618 241 aaKnown RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 AGAP20933 346 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 HTR2CP28335 458 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 HSD11B1P28845 292 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 CAPZA1P52907 286 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 FAM27E3Q08E93 113 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 SNTB2Q13425 540 aaKnown RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 HIKESHIQ53FT3 197 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 SKA3Q8IX90 412 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 ZNF808Q8N4W9 903 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 GCDHQ92947 438 aaPredicted RBP12.95□□□□□ -0.34
CAPN3-207ENST00000397200 RNF170Q96K19 258 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 CACNG6Q9BXT2 260 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 GHITMQ9H3K2 345 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 HRASLSQ9HDD0 168 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 KCNJ16Q9NPI9 418 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 NUDT15Q9NV35 164 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 POU2F3Q9UKI9 436 aa12.95□□□□□ -0.34
CAPN3-207ENST00000397200 RELNP78509 3460 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 A0A0A6YYH2 397 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 NKX2-6A6NCS4 301 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 A6NJ64 397 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 RER1O15258 196 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 SYT7O43581 403 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 DHFRP00374 187 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 GIFP27352 417 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 ZNF121P58317 390 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-207ENST00000397200 UBE2NP61088 152 aaKnown RBP12.94□□□□□ -0.34
CAPN3-207ENST00000397200 FBXL19-AS1Q494R0 122 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 Q6ZSR3 168 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 C17orf78Q8N4C9 275 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 STEAP2Q8NFT2 490 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 OR8B12Q8NGG6 310 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 OR1J2Q8NGS2 313 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 ITLN2Q8WWU7 325 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-207ENST00000397200 NANOS1Q8WY41 292 aaKnown RBP12.94□□□□□ -0.34
CAPN3-207ENST00000397200 BOD1Q96IK1 185 aa12.94□□□□□ -0.34
CAPN3-207ENST00000397200 A0A1B0GVI7 797 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 C16orf97H3BN30 126 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 H7C417 338 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 DOK2O60496 412 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 CLDN14O95500 239 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 MT-ND4P03905 459 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 GSTT2BP0CG30 244 aa12.93□□□□□ -0.34
CAPN3-207ENST00000397200 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms