RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 MT-ATP6P00846 226 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 SFTPBP07988 381 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 HOXB2P14652 356 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 HSD11B1P28845 292 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 SULT1A1P50225 295 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 LSM6P62312 80 aaKnown RBP8.15□□□□□ -1.11
CAPN3-206ENST00000397163 NSUN5P2Q63ZY6 315 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 PTCRAQ6ISU1 281 aaPredicted RBP8.15□□□□□ -1.11
CAPN3-206ENST00000397163 NUP54Q7Z3B4 507 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 REC114Q7Z4M0 266 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 ANGPTL5Q86XS5 388 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 AQP10Q96PS8 301 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 NICN1Q9BSH3 213 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 CHST5Q9GZS9 411 aa8.15□□□□□ -1.11
CAPN3-206ENST00000397163 TNFRSF10CO14798 259 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 SCGNO76038 276 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 MPIG6BO95866 241 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 CSTBP04080 98 aaKnown RBP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 CLPSP04118 112 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ISG15P05161 165 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 CELA2BP08218 269 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 HOXB5P09067 269 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 COL9A1P20849 921 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 HNRNPA2B1P22626 353 aaKnown RBP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 IL12BP29460 328 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 KIR2DL1P43626 348 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 SLC6A9P48067 706 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 CSNK1EP49674 416 aaKnown RBP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF84P51523 738 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 NUBP1P53384 320 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 CLDN6P56747 220 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 RNF4P78317 190 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 FMODQ06828 376 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 OR8G1Q15617 311 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 RAB30Q15771 203 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 PRTGQ2VWP7 1150 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF343Q6P1L6 599 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 HIST2H3AQ71DI3 136 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 LYPD6Q86Y78 171 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 TMEM230Q96A57 120 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 SPACA5Q96QH8 159 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 OR11A1Q9GZK7 315 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 SLC5A7Q9GZV3 580 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 CRLF2Q9HC73 371 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 OBP2AQ9NY56 170 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 PPP4R1LQ9P1A2 415 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 GPR132Q9UNW8 380 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 RHBDD3Q9Y3P4 386 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 FREM3P0C091 2139 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF727A8MUV8 499 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 SRSF10O75494 262 aaKnown RBP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 PET100P0DJ07 73 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 OR13C7P0DN81 318 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 FABP4P15090 132 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 PCP4P48539 62 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ANKRD55Q3KP44 614 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 Q6ZSR6 202 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ARHGEF39Q8N4T4 335 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF248Q8NDW4 579 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ADAT3Q96EY9 351 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 OR10C1Q96KK4 312 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 C2orf50Q96LR7 162 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 TBL1XR1Q9BZK7 514 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 EIF5A2Q9GZV4 153 aaKnown RBP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 DOK5Q9P104 306 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 TMED7-TICAM2A0A0A6YYA0 188 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 MFNGO00587 321 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 AHSA1O95433 338 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 TNFP01375 233 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 POU2F2P09086 479 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 HLA-DOBP13765 273 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 PGCP20142 388 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 HSD17B7P56937 341 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 HHEXQ03014 270 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF616Q08AN1 781 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF674Q2M3X9 581 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 C1orf140Q5VVS0 124 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 KLHL24Q6TFL4 600 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 CYYR1Q96J86 154 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 SLC5A6Q9Y289 635 aa8.14□□□□□ -1.11
CAPN3-206ENST00000397163 PUS1Q9Y606 427 aaKnown RBP eCLIP8.14□□□□□ -1.11
CAPN3-206ENST00000397163 BLACEA4D250 179 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 PLPP3O14495 311 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 NSA2O95478 260 aaKnown RBP8.13□□□□□ -1.11
CAPN3-206ENST00000397163 CD5P06127 495 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 AMY2BP19961 511 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 ZNF93P35789 620 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-206ENST00000397163 FHITP49789 147 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 SLC37A1P57057 533 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 QRFPP83859 136 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 TFF2Q03403 129 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 C1orf61Q13536 156 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 ARFRP1Q13795 201 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 COMMD2Q86X83 199 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 OR5D14Q8NGL3 314 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 OR5H2Q8NGV7 314 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 ADAMTS18Q8TE60 1221 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 SCGB3A2Q96PL1 93 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 FOXQ1Q9C009 403 aa8.13□□□□□ -1.11
CAPN3-206ENST00000397163 SLC26A1Q9H2B4 701 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms