RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 PTAFRP25105 342 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 TNFSF8P32971 234 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 ZNF45Q02386 682 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 TLE1Q04724 770 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 SPOCK1Q08629 439 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 UBE2V2Q15819 145 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 XKRXQ6PP77 449 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-209ENST00000397036 ZNF808Q8N4W9 903 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-209ENST00000397036 OR13C9Q8NGT0 318 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 ZFAND2BQ8WV99 257 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 SLC25A28Q96A46 364 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 HAVCR1Q96D42 359 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 SORCS2Q96PQ0 1159 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 C1QTNF6Q9BXI9 259 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 WDR12Q9GZL7 423 aaKnown RBP11.71□□□□□ -0.53
MCF2L-209ENST00000397036 MIXL1Q9H2W2 232 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 CXorf56Q9H5V9 222 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 ABCB9Q9NP78 766 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 NGBQ9NPG2 151 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 NPAP1Q9NZP6 1156 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 KCNN3Q9UGI6 736 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 ADAM30Q9UKF2 790 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 RHBDD3Q9Y3P4 386 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 SPEF1Q9Y4P9 236 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 ETV7Q9Y603 341 aa11.71□□□□□ -0.53
MCF2L-209ENST00000397036 TPPPO94811 219 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 NRASP01111 189 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 APOA1P02647 267 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 SLC2A2P11168 524 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 ALDH3B1P43353 468 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 EVX1P49640 407 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 RAB11BQ15907 218 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 C22orf34Q6ZV56 151 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 LRRC28Q86X40 367 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 MFSD4AQ8N468 514 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 OR52N4Q8NGI2 321 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 UBASH3BQ8TF42 649 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 PTX4Q96A99 478 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CPNE2Q96FN4 548 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 MARS2Q96GW9 593 aaKnown RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 PLGRKTQ9HBL7 147 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 KCNJ16Q9NPI9 418 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CYSLTR2Q9NS75 346 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 PTTG3PQ9NZH4 202 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 COMMD3Q9UBI1 195 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 GHRLQ9UBU3 117 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CADP27708 2225 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 NBEAQ8NFP9 2946 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 KALRNO60229 2985 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 GGT3PA6NGU5 568 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 A6NIN4 97 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 RGS5O15539 181 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 THBDP07204 575 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 BMP4P12644 408 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CD40P25942 277 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 HTR2CP28335 458 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CD40LGP29965 261 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CALCRP30988 508 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 ZNF93P35789 620 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 ZNF83P51522 516 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 NKX6-1P78426 367 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 ZNF846Q147U1 533 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CNN3Q15417 329 aaKnown RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 SPANXN2Q5MJ10 180 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 MBNL2Q5VZF2 373 aaKnown RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 TMEM108Q6UXF1 575 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 OR1J1Q8NGS3 322 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 ZNF671Q8TAW3 534 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 TRMT10AQ8TBZ6 339 aaKnown RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CA5BP1Q8WTZ4 195 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CEP19Q96LK0 163 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 ABCG5Q9H222 651 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 POFUT1Q9H488 388 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 LIN7BQ9HAP6 207 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 MRPL15Q9P015 296 aaKnown RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 RABL2AQ9UBK7 228 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-209ENST00000397036 RABL2BQ9UNT1 228 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 MPC1Q9Y5U8 109 aa11.7□□□□□ -0.54
MCF2L-209ENST00000397036 CFAP46Q8IYW2 2715 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 IQCF6A8MYZ5 107 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 M0R1B8 84 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 PAHP00439 452 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 KITLGP21583 273 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 GNLYP22749 145 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 GLRXP35754 106 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 FUT6P51993 359 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 HLXQ14774 488 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-209ENST00000397036 ZNF718Q3SXZ3 478 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 HES5Q5TA89 166 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 PRR7Q8TB68 274 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 SLC25A40Q8TBP6 338 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 RAB40AQ8WXH6 277 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 FAM3DQ96BQ1 224 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 CMBLQ96DG6 245 aa11.69□□□□□ -0.54
MCF2L-209ENST00000397036 OR2J1Q9GZK6 312 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms