RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 DDOSTP39656 456 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 MXRA7P84157 204 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 DRAM2Q6UX65 266 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 DPY19L2P2Q6ZN68 376 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 ZBTB46Q86UZ6 589 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 OR10Z1Q8NGY1 313 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 OR8S1Q8NH09 359 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 SPSB4Q96A44 273 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 KCTD12Q96CX2 325 aaKnown RBP6.8□□□□□ -1.32
SCFD1-202ENST00000396629 TPD52L3Q96J77 140 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 MAP6Q96JE9 813 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 SH3GL1Q99961 368 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 SRA1Q9HD15 236 aaKnown RBP6.8□□□□□ -1.32
SCFD1-202ENST00000396629 INPP5EQ9NRR6 644 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 ZNF391Q9UJN7 358 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 SNX13Q9Y5W8 968 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 DNAH7Q8WXX0 4024 aa6.8□□□□□ -1.32
SCFD1-202ENST00000396629 TRBV23-1A0A0A0MS06 115 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 FAM90A8PA6NJQ4 464 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 ANKRD30BLA7E2S9 258 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 H0YAE9 185 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 PEX14O75381 377 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 ACAA1P09110 424 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-202ENST00000396629 NDUFB7P17568 137 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 POU1F1P28069 291 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 RPS6KA3P51812 740 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 SPIBQ01892 262 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 CYLC2Q14093 348 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-202ENST00000396629 LRRC23Q53EV4 343 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-202ENST00000396629 Q6ZS46 218 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 MKXQ8IYA7 352 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 OR5AU1Q8NGC0 362 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 OR8J3Q8NGG0 315 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 ANGPTL6Q8NI99 470 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 LZICQ8WZA0 190 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 FAM46AQ96IP4 442 aaKnown RBP6.79□□□□□ -1.32
SCFD1-202ENST00000396629 GPR61Q9BZJ8 451 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 MUC13Q9H3R2 512 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 HEXA-AS1Q9H8Q6 139 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 KCNG2Q9UJ96 466 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 DNAH1Q9P2D7 4330 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 CDIPTO14735 213 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 TFF1P04155 84 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 IFNW1P05000 195 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 NOS3P29474 1203 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 VDAC2P45880 294 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-202ENST00000396629 TCTEX1D4Q5JR98 221 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 DYNAPQ8N1N2 210 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 C11orf42Q8N5U0 333 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 CYB561A3Q8NBI2 242 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 OR5K1Q8NHB7 308 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 OR5M11Q96RB7 305 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 WDR13Q9H1Z4 485 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 ANKRD19PQ9H560 264 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 SNTG1Q9NSN8 517 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 MRPL22Q9NWU5 206 aaKnown RBP6.79□□□□□ -1.32
SCFD1-202ENST00000396629 TSSC4Q9Y5U2 329 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-202ENST00000396629 TENM2Q9NT68 2774 aa6.79□□□□□ -1.32
SCFD1-202ENST00000396629 FXYD1O00168 92 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 XRCC2O43543 280 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 SYNGR1O43759 233 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 GLCEO94923 617 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 RENP00797 406 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 ALDOBP05062 364 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 OMPP47874 163 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 MAGOHP61326 146 aaKnown RBP6.78□□□□□ -1.32
SCFD1-202ENST00000396629 BLCAPP62952 87 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 FAM3AP98173 230 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 KLHL22Q53GT1 634 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 RRM2BQ7LG56 351 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 RNF144BQ7Z419 303 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 VTCN1Q7Z7D3 282 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 TMEM219Q86XT9 240 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 LNX2Q8N448 690 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 LINC00482Q8N8I6 264 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 TLCD1Q96CP7 247 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 RSRC1Q96IZ7 334 aaKnown RBP6.78□□□□□ -1.32
SCFD1-202ENST00000396629 PPP1R3EQ9H7J1 279 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 ELL3Q9HB65 397 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-202ENST00000396629 PITPNC1Q9UKF7 332 aa6.78□□□□□ -1.32
SCFD1-202ENST00000396629 TCRBV4S1A1TA0A5B7 111 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 FAM220BPB1ANY3 271 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 F2RL2O00254 374 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 TROVE2P10155 538 aaKnown RBP eCLIP6.77□□□□□ -1.32
SCFD1-202ENST00000396629 RAB13P51153 203 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 LGALS4P56470 323 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 TMEM95Q3KNT9 176 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 NKAPLQ5M9Q1 402 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 CASC10Q5T4H9 136 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 CCDC121Q6ZUS5 278 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 LHFPL4Q7Z7J7 247 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 FAM185AQ8N0U4 392 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 RPS4Y2Q8TD47 263 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 DPF1Q92782 380 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 ERMAPQ96PL5 475 aaPredicted RBP6.77□□□□□ -1.32
SCFD1-202ENST00000396629 NMNAT3Q96T66 252 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 RPRD1BQ9NQG5 326 aaKnown RBP6.77□□□□□ -1.32
SCFD1-202ENST00000396629 LRP12Q9Y561 859 aa6.77□□□□□ -1.32
SCFD1-202ENST00000396629 PCDHGB5Q9Y5G0 923 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms