RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 MFNGO00587 321 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 LAMTOR5O43504 91 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 FREM3P0C091 2139 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 GLB1P16278 677 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 NFYBP25208 207 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 TMEM50BP56557 158 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 COX15Q7KZN9 410 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 OR5AS1Q8N127 324 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 KDM8Q8N371 416 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 OR13C9Q8NGT0 318 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 SSC4DQ8WTU2 575 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 C11orf40Q8WZ69 217 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 ZDHHC12Q96GR4 267 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 OR10C1Q96KK4 312 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 MOB1AQ9H8S9 216 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRIM40-207ENST00000396581 LHX6Q9UPM6 363 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 FAM96BQ9Y3D0 163 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 A0A0C4DFX4 3053 aa11.78□□□□□ -0.52
TRIM40-207ENST00000396581 PCDH15Q96QU1 1955 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 NPIPA5E9PKD4 350 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 CDC14BO60729 498 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 FBXO24O75426 580 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 LPAR6P43657 344 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 GFERP55789 205 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 RAB32Q13637 225 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 SLC9A3R2Q15599 337 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 FAM189A2Q15884 450 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 AADACL3Q5VUY0 350 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 TMEM268Q5VZI3 342 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 HLA-DQA1Q5Y7H0 255 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 KLHL24Q6TFL4 600 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 H1FNTQ75WM6 255 aaPredicted RBP11.77□□□□□ -0.52
TRIM40-207ENST00000396581 C1orf210Q8IVY1 113 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 TMEM104Q8NE00 496 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 KCNG3Q8TAE7 436 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 RAB3CQ96E17 227 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 MVB12AQ96EY5 273 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 HRH4Q9H3N8 390 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 PARP11Q9NR21 331 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 CUTCQ9NTM9 273 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 SUSD2Q9UGT4 822 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 NPIPA1Q9UND3 350 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 PCDHGA1Q9Y5H4 931 aa11.77□□□□□ -0.52
TRIM40-207ENST00000396581 IGHV1OR21-1A0A087WYE8 117 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 FIGNL2A6NMB9 653 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 SOCS1O15524 211 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 RAD51DO75771 328 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 SFTA3P0C7M3 94 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 NPY4RP50391 375 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 HSF1Q00613 529 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 ECH1Q13011 328 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 HABP2Q14520 560 aaPredicted RBP11.77□□□□□ -0.53
TRIM40-207ENST00000396581 PEA15Q15121 130 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 CARFQ8N187 725 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 C15orf54Q8N8G6 183 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 KDF1Q8NAX2 398 aaPredicted RBP11.77□□□□□ -0.53
TRIM40-207ENST00000396581 OR1N1Q8NGS0 311 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 TMEM234Q8WY98 164 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 ST8SIA1Q92185 356 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 DAZLQ92904 295 aaKnown RBP11.77□□□□□ -0.53
TRIM40-207ENST00000396581 TGM7Q96PF1 710 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 TIMM10BQ9Y5J6 103 aa11.77□□□□□ -0.53
TRIM40-207ENST00000396581 PMS2P1A4D2B8 440 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 LRP3O75074 770 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 GAPDHP04406 335 aaKnown RBP11.76□□□□□ -0.53
TRIM40-207ENST00000396581 HKR1P10072 659 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF84P51523 738 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 P2RY4P51582 365 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 HSD11B2P80365 405 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 SURF2Q15527 256 aaPredicted RBP11.76□□□□□ -0.53
TRIM40-207ENST00000396581 RNF144BQ7Z419 303 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 TMEM200AQ86VY9 491 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 FAM89BQ8N5H3 189 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 OR13G1Q8NGZ3 307 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 OR51F2Q8NH61 342 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.76□□□□□ -0.53
TRIM40-207ENST00000396581 TAF9BQ9HBM6 251 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 SMCO4Q9NRQ5 59 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 MRPS28Q9Y2Q9 187 aaKnown RBP11.76□□□□□ -0.53
TRIM40-207ENST00000396581 UNC13CQ8NB66 2214 aa11.76□□□□□ -0.53
TRIM40-207ENST00000396581 ANKUB1A6NFN9 424 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 FOXI3A8MTJ6 420 aaPredicted RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 EIF3GO75821 320 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 FARS2O95363 451 aaKnown RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 ACAA1P09110 424 aaPredicted RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 CCL1P22362 96 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 PTGFRP43088 359 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 OR1D4P47884 311 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 OR1D5P58170 312 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 EIF3IQ13347 325 aaKnown RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 RNF212Q495C1 297 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 RPL7L1Q6DKI1 246 aaKnown RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 LURAP1LQ8IV03 231 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF101Q8IZC7 436 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 OR56B1Q8NGI3 324 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 ARL5BQ96KC2 179 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 NECAB3Q96P71 396 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms