RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ZNF738Q8NE65 137 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR5B17Q8NGF7 314 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR8K1Q8NGG5 319 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR10J6PQ8NGY7 276 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ACTRT1Q8TDG2 376 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 TCP10LQ8TDR4 215 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 IL22RA2Q969J5 263 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 NTAN1Q96AB6 310 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 PHYHIPLQ96FC7 376 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 RNF185Q96GF1 192 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 MICU1Q9BPX6 476 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF426Q9BUY5 554 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 TMEM9BQ9NQ34 198 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 C1orf109Q9NX04 203 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 TAS2R9Q9NYW1 312 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 DEC1Q9P2X7 70 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF629Q9UEG4 869 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 YARS2Q9Y2Z4 477 aaKnown RBP3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 TSSC4Q9Y5U2 329 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 KCNE3Q9Y6H6 103 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 SMAD5-AS1Q9Y6J3 95 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 NESP48681 1621 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 NFASCO94856 1347 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 PDS5BQ9NTI5 1447 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 NCOA3Q9Y6Q9 1424 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 GNG14A0A1W2PPG7 69 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 TSPAN11A1L157 253 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 F8VP50 259 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 XKRYO14609 159 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 AQP9O43315 295 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 RAD51CO43502 376 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 SNAI2O43623 268 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 SNRPAP09012 282 aaKnown RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR5H8P0DN80 308 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 HSPD1P10809 573 aaKnown RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 NR2C1P13056 603 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 NQO1P15559 274 aaKnown RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 RFC3P40938 356 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 GPR1P46091 355 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 CAPZBP47756 277 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 IDH2P48735 452 aaKnown RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 SERPINB8P50452 374 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 RPL14P50914 215 aaKnown RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNHIT3Q15649 155 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 TNXAQ16473 311 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 ACTBL2Q562R1 376 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 CCNJQ5T5M9 372 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 IDNKQ5T6J7 187 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF493Q6ZR52 646 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 CCDC121Q6ZUS5 278 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 ABHD13Q7L211 337 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 STRADAQ7RTN6 431 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 FUNDC1Q8IVP5 155 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 ATP6V1C2Q8NEY4 427 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR6K2Q8NGY2 324 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR2L8Q8NGY9 312 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR51F2Q8NH61 342 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 DNAJB3Q8WWF6 145 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 TMEM158Q8WZ71 300 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 ISOC2Q96AB3 205 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 NRTNQ99748 197 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 EBNA1BP2Q99848 306 aaKnown RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 FOXC2Q99958 501 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 MRPS26Q9BYN8 205 aaKnown RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 WDR55Q9H6Y2 383 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 C12orf4Q9NQ89 552 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF226Q9NYT6 803 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 PCYOX1Q9UHG3 505 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 V9GYY9 64 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 GTF3C1Q12789 2109 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 MEGF6O75095 1541 aa3.38□□□□□ -1.87
HMGB1P10-201ENST00000395823 FUOMA2VDF0 154 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 CLDN34H7C241 214 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 CD5LO43866 347 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 SMIM24O75264 130 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 LSM8O95777 96 aaKnown RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 IFNA5P01569 189 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 RD3LP0DJH9 198 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 GGT1P19440 569 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 G0S2P27469 103 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 HLA-DMAP28067 261 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 CEACAM3P40198 252 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 SLCO1A2P46721 670 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 NMUP48645 174 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 CDK9P50750 372 aaKnown RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 NKX2-5P52952 324 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 SEMG2Q02383 582 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 CKAP4Q07065 602 aaKnown RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 SPA17Q15506 151 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 TMEM255AQ5JRV8 349 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 TPRG1LQ5T0D9 272 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 OGFRL1Q5TC84 451 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 METTL21CQ5VZV1 264 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR2W3Q7Z3T1 314 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 OAFQ86UD1 273 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 NT5DC3Q86UY8 548 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 C11orf53Q8IXP5 236 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 CYP4Z2PQ8N1L4 340 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 ARRDC1Q8N5I2 433 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 ACBD4Q8NC06 268 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms