RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 NR2C1P13056 603 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 CTAG1AP78358 180 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 ZNF169Q14929 603 aaPredicted RBP12.26□□□□□ -0.45
SNCA-204ENST00000394989 ZNF528Q3MIS6 628 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 SLC22A6Q4U2R8 563 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 AWAT2Q6E213 333 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 RGS7BPQ6MZT1 257 aaPredicted RBP12.26□□□□□ -0.45
SNCA-204ENST00000394989 C20orf196Q8IYI0 205 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 TMEM104Q8NE00 496 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 OR14K1Q8NGZ2 314 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 FBXO17Q96EF6 278 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 WBP1Q96G27 269 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 NICN1Q9BSH3 213 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 DDA1Q9BW61 102 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 STRADBQ9C0K7 418 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 GPN1Q9HCN4 374 aaPredicted RBP12.26□□□□□ -0.45
SNCA-204ENST00000394989 MLXQ9UH92 298 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 LHX6Q9UPM6 363 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 ZFHX4Q86UP3 3567 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 F5H5K5 113 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 ATG12O94817 140 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 RAB3DO95716 219 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 CD74P04233 296 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 SERPINA7P05543 415 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 JMJD7P0C870 316 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 OR3A4PP47883 348 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 STARP49675 285 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 CAPZA1P52907 286 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 C11orf88Q6PI97 169 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 MUC20Q8N307 709 aaPredicted RBP12.26□□□□□ -0.45
SNCA-204ENST00000394989 GVQW1Q8N7I0 195 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 GJC3Q8NFK1 279 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 A0A0A6YYD4 124 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 METTL21EPA6NDL7 271 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 ZNF716A6NP11 495 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 OR2A4O95047 310 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 DBHP09172 617 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 OTX1P32242 354 aaPredicted RBP12.25□□□□□ -0.45
SNCA-204ENST00000394989 H2BFSP57053 126 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 WIPI1Q5MNZ9 446 aaPredicted RBP12.25□□□□□ -0.45
SNCA-204ENST00000394989 DOK3Q7L591 496 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 FJX1Q86VR8 437 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 ADGRG7Q96K78 797 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 OR2A7Q96R45 310 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 ULBP2Q9BZM5 246 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 SLCO5A1Q9H2Y9 848 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 FBLN5Q9UBX5 448 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 ZNF175Q9Y473 711 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 FLVCR1Q9Y5Y0 555 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 SPENQ96T58 3664 aaKnown RBP12.25□□□□□ -0.45
SNCA-204ENST00000394989 AHCTF1Q8WYP5 2266 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 GJE1A6NN92 205 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 CYB5AP00167 134 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 MELTFP08582 738 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 CDNFQ49AH0 187 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 RAB12Q6IQ22 244 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 PGAP1Q75T13 922 aa12.25□□□□□ -0.45
SNCA-204ENST00000394989 LIN37Q96GY3 246 aaPredicted RBP12.25□□□□□ -0.45
SNCA-204ENST00000394989 SF3B5Q9BWJ5 86 aaKnown RBP12.25□□□□□ -0.45
SNCA-204ENST00000394989 ZNF736B4DX44 427 aaPredicted RBP12.24□□□□□ -0.45
SNCA-204ENST00000394989 GNB3P16520 340 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 GUCA1AP43080 201 aaPredicted RBP12.24□□□□□ -0.45
SNCA-204ENST00000394989 CYB561P49447 251 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 FOXO1Q12778 655 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 SPINK14Q6IE38 97 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 GLIPR1L1Q6UWM5 242 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 NUDCD2Q8WVJ2 157 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 ROBO4Q8WZ75 1007 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 LPAR5Q9H1C0 372 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 CFAP47Q6ZTR5 3102 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 A0A1W2PP11 408 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 DNPH1O43598 174 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 RP2O75695 350 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 AMY2AP04746 511 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 ERCC1P07992 297 aaPredicted RBP12.24□□□□□ -0.45
SNCA-204ENST00000394989 GIPP09681 153 aaPredicted RBP12.24□□□□□ -0.45
SNCA-204ENST00000394989 CBX5P45973 191 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 CARD18P57730 90 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 HLXQ14774 488 aaPredicted RBP12.24□□□□□ -0.45
SNCA-204ENST00000394989 LRRC37A5PQ49AS3 106 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 CDH26Q8IXH8 852 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 KCNE4Q8WWG9 221 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 MRGPRFQ96AM1 343 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 SLC6A7Q99884 636 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 POFUT1Q9H488 388 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 LDAHQ9H6V9 325 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 EXO5Q9H790 373 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 B2MP61769 119 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 ATXN7L3Q14CW9 347 aaPredicted RBP12.24□□□□□ -0.45
SNCA-204ENST00000394989 OR52W1Q6IF63 320 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 TFAP2EQ6VUC0 442 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 CHST4Q8NCG5 386 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 OR13C8Q8NGS7 320 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 PGAM5Q96HS1 289 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 TAS2R3Q9NYW6 316 aa12.24□□□□□ -0.45
SNCA-204ENST00000394989 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
SNCA-204ENST00000394989 MRPS28Q9Y2Q9 187 aaKnown RBP12.24□□□□□ -0.45
SNCA-204ENST00000394989 CCDC187A0A096LP49 1063 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 MCRIP1C9JLW8 97 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms