RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 LRRC18Q8N456 261 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 FAM89BQ8N5H3 189 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 ZBTB44Q8NCP5 570 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 SFXN2Q96NB2 322 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 TAAR9Q96RI9 348 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 KIF25Q9UIL4 384 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 VSIG4Q9Y279 399 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 LRRC3CA6NJW4 275 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 F5H5K5 113 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 NAT2P11245 290 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 NKPD1Q17RQ9 610 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 GFOD2Q3B7J2 385 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 SLC22A6Q4U2R8 563 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 PLAC9Q5JTB6 97 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 OR52W1Q6IF63 320 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 TCEAL6Q6IPX3 200 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 YRDCQ86U90 279 aaKnown RBP13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 PP6455Q8WZ26 134 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 TCEAL3Q969E4 200 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 FBXO17Q96EF6 278 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 ZNF837Q96EG3 531 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 IFT46Q9NQC8 304 aa13.46□□□□□ -0.25
UBE2D3-207ENST00000394801 ZNF716A6NP11 495 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 MPIG6BO95866 241 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 HOXD4P09016 255 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 HIST1H1DP16402 221 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 S100A11P31949 105 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 CARD18P57730 90 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 GMFBP60983 142 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 KISS1Q15726 138 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 PNLIPRP3Q17RR3 467 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 FAHD2BQ6P2I3 314 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 FAM122CQ6P4D5 195 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 RAB11FIP2Q7L804 512 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 ESX1Q8N693 406 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 OR14L1PQ8NHC6 308 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 RAB3CQ96E17 227 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 FAHD2AQ96GK7 314 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 ADGRG7Q96K78 797 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 DDA1Q9BW61 102 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 STRADBQ9C0K7 418 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 C12orf4Q9NQ89 552 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 M0R135 149 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 SOCS1O15524 211 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 IL2RAP01589 272 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 RFPL3SP0C7P2 107 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 HLA-GP17693 338 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 ZBTB25P24278 435 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 NTF4P34130 210 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 HRH1P35367 487 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 CD96P40200 585 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 MPLP40238 635 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 NHLRC3Q5JS37 347 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 LPCAT3Q6P1A2 487 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 C11orf88Q6PI97 169 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 DTX1Q86Y01 620 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 OR56B1Q8NGI3 324 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 PSMF1Q92530 271 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 ZNF799Q96GE5 643 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 URM1Q9BTM9 101 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 RDH8Q9NYR8 311 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 WDFY4Q6ZS81 3184 aa13.45□□□□□ -0.26
UBE2D3-207ENST00000394801 TSPAN9O75954 239 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 CD8AP01732 235 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 CSN2P05814 226 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 CRYGSP22914 178 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 PTGFRP43088 359 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 SLC6A9P48067 706 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 HLXQ14774 488 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 C3P1Q6ZMU1 363 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 RTN4RL2Q86UN3 420 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 GPR137CQ8N3F9 429 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 PNLDC1Q8NA58 520 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 SPTSSAQ969W0 71 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 LIN37Q96GY3 246 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 GPER1Q99527 375 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 CHST5Q9GZS9 411 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 P4HTMQ9NXG6 502 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 PLEK2Q9NYT0 353 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 COQ3Q9NZJ6 369 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 PCDHGA1Q9Y5H4 931 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 A0A1W2PP11 408 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 RFPL4AA6NLU0 287 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 RFPL4AL1F8VTS6 287 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 ARPC5O15511 151 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 MTRF1O75570 445 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 CYB561P49447 251 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 GK2Q14410 553 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 UBE2V2Q15819 145 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 TMUB2Q71RG4 321 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 SLC16A14Q7RTX9 510 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 STEAP2Q8NFT2 490 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 OR5M8Q8NGP6 311 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 PCNPQ8WW12 178 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 WBP1Q96G27 269 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 OCSTAMPQ9BR26 566 aa13.44□□□□□ -0.26
UBE2D3-207ENST00000394801 CST11Q9H112 138 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms