RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 WDFY2Q96P53 400 aa12.91□□□□□ -0.34
PPARGC1B-203ENST00000394320 UBE2MP61081 183 aaKnown RBP12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 SRSF5Q13243 272 aaKnown RBP12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 SOHLH1Q5JUK2 328 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 CBLN3Q6UW01 205 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 Q6ZRG5 221 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 HSD17B11Q8NBQ5 300 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 OR2I1PQ8NGU4 316 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 APOBEC4Q8WW27 367 aaKnown RBP12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 ARV1Q9H2C2 271 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 CD3DP04234 171 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 GNB3P16520 340 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 OPRM1P35372 400 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 STARD6P59095 220 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 UBE2KP61086 200 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 TMUB2Q71RG4 321 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 SLC36A1Q7Z2H8 476 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 DEFB108BQ8NET1 73 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 COL11A1P12107 1806 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 TRGV10A0A0A0MS01 117 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 SHISA8B8ZZ34 492 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 E5RGE8 158 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 K7EQM0 130 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 FUCA1P04066 466 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 NME2P22392 152 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 PSMB3P49720 205 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 USF2Q15853 346 aaPredicted RBP12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 CCDC190Q86UF4 302 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 SLC30A7Q8NEW0 376 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 AP1S3Q96PC3 154 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 SUCNR1Q9BXA5 334 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 QPCTLQ9NXS2 382 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 NSG2Q9Y328 171 aa12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
PPARGC1B-203ENST00000394320 OR2M5A3KFT3 312 aa12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 GABRB1P18505 474 aa12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 FAM74A1Q5RGS3 127 aa12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 SLC25A30Q5SVS4 291 aa12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 SMIM15Q7Z3B0 74 aa12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 NAA40Q86UY6 237 aa12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 GALMQ96C23 342 aa12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 MBD1Q9UIS9 605 aaPredicted RBP12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 ZNF638Q14966 1978 aaKnown RBP12.9□□□□□ -0.35
PPARGC1B-203ENST00000394320 OR5B21A6NL26 309 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 TNFSF12O43508 249 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 GP1BAP07359 652 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 HRH1P35367 487 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 ZNF468Q5VIY5 522 aaPredicted RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 OR5M9Q8NGP3 310 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 TERB2Q8NHR7 220 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 C10orf35Q96D05 121 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 EML2O95834 649 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 ZNF32P17041 273 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 CDKN2AP42771 156 aaKnown RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 SSX8Q7RTT4 187 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 LYG2Q86SG7 212 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 SLC38A6Q8IZM9 456 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 MRPS24Q96EL2 167 aaKnown RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 DERL3Q96Q80 235 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 ADAT1Q9BUB4 502 aaKnown RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 IL5P05113 134 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 NGFRP08138 427 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 SNRNP70P08621 437 aaKnown RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 OR4E1P0C645 316 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 PPT1P50897 306 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 TMEM108Q6UXF1 575 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 RHOUQ7L0Q8 258 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 TMEM217Q8N7C4 229 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 GDF15Q99988 308 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 RHNO1Q9BSD3 238 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 AUNIPQ9H7T9 357 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 PCYT1BQ9Y5K3 369 aaPredicted RBP12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 SCN10AQ9Y5Y9 1956 aa12.89□□□□□ -0.35
PPARGC1B-203ENST00000394320 LIPT2A6NK58 231 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 LGALS8O00214 317 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 CCL4P13236 92 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 MDH2P40926 338 aaKnown RBP12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 FMODQ06828 376 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 TSEN54Q7Z6J9 526 aaKnown RBP12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 RTN4IP1Q8WWV3 396 aaPredicted RBP12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 C2orf50Q96LR7 162 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 DDOQ99489 341 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 MYOZ1Q9NP98 299 aaPredicted RBP12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 ZFPL1O95159 310 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 HLA-HP01893 362 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 LRRC10Q5BKY1 277 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 PABPC1L2AQ5JQF8 200 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 PTPMT1Q8WUK0 201 aaPredicted RBP12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 EXTL1Q92935 676 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 PIGMQ9H3S5 423 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 TAF9BQ9HBM6 251 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 AMDHD2Q9Y303 409 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 MPC1Q9Y5U8 109 aa12.88□□□□□ -0.35
PPARGC1B-203ENST00000394320 TDRD15B5MCY1 1934 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms