RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 RBM4BQ9BQ04 359 aaKnown RBP14.4□□□□□ -0.1
SNRPA1-202ENST00000394082 RGCCQ9H4X1 137 aa14.4□□□□□ -0.1
SNRPA1-202ENST00000394082 hCG_38984A0A1B0GV85 526 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 DHRS12A0PJE2 317 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 FBP1P09467 338 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 MSX2P35548 267 aaPredicted RBP14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 TGM4P49221 684 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 CX3CR1P49238 355 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 KRTAP10-3P60369 221 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 TIGD6Q17RP2 521 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 WDR38Q5JTN6 314 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 LINC01590Q5TEZ4 76 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 OR10Z1Q8NGY1 313 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 RNF133Q8WVZ7 376 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 REEP6Q96HR9 211 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 TSSK6Q9BXA6 273 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 DGCR6LQ9BY27 220 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 ABCB9Q9NP78 766 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 TBC1D23Q9NUY8 699 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 ACTR3BQ9P1U1 418 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 FAM96BQ9Y3D0 163 aa14.39□□□□□ -0.11
SNRPA1-202ENST00000394082 TSPAN9O75954 239 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 CCNB2O95067 398 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 IFNGP01579 166 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 HSD11B1P28845 292 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 IL5RAQ01344 420 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 FAM76BQ5HYJ3 339 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 STUMQ69YW2 141 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 C16orf89Q6UX73 402 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 ITFG2Q969R8 447 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 CCL13Q99616 98 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 DCTN5Q9BTE1 182 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 FAM107BQ9H098 131 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 MAGIXQ9H6Y5 334 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 CMC2Q9NRP2 79 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 ZNRD1Q9P1U0 126 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 VPREB3Q9UKI3 123 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 MPC1Q9Y5U8 109 aa14.38□□□□□ -0.11
SNRPA1-202ENST00000394082 IGHV3OR15-7A0A075B7D8 119 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 BTBD17A6NE02 478 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 SLC22A31A6NKX4 558 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 TBX1O43435 398 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 NDUFB3O43676 98 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 GYPBP06028 91 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 ANXA2P07355 339 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 ZNF3P17036 446 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 TGFBR2P37173 567 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 GNALP38405 381 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 GSK3AP49840 483 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 POU4F2Q12837 409 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 EIF2B1Q14232 305 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 GK3PQ14409 553 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 KLHL12Q53G59 568 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 LRRC10Q5BKY1 277 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 CD300LDQ6UXZ3 194 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 Q6ZSV7 163 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 SHFQ7M4L6 423 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 AQP11Q8NBQ7 271 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 OR6K6Q8NGW6 343 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 OR4Q3Q8NH05 313 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 OR5R1Q8NH85 324 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 ITPKCQ96DU7 683 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 MICU1Q9BPX6 476 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 ABHD6Q9BV23 337 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 OR10A2Q9H208 303 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 TAGLN3Q9UI15 199 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 ZNF391Q9UJN7 358 aa14.37□□□□□ -0.11
SNRPA1-202ENST00000394082 TMEM210A6NLX4 147 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 ANXA2P2A6NMY6 339 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 RIIAD1A6NNX1 92 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 ACOT8O14734 319 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 CLUP10909 449 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 AMY2BP19961 511 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 EEF1B2P24534 225 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 OPRL1P41146 370 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 ZNF121P58317 390 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 CSNK2BP67870 215 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 ACSM1Q08AH1 577 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 MICAQ29983 383 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 CPLX4Q7Z7G2 160 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 Q8N7P7 452 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 TNFRSF14Q92956 283 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 UBE2FQ969M7 185 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 MED30Q96HR3 178 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 INTS14Q96SY0 518 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 TCF7L1Q9HCS4 588 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 HAO2Q9NYQ3 351 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 ONECUT1Q9UBC0 465 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 RHBDD3Q9Y3P4 386 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 N6AMT1Q9Y5N5 214 aa14.36□□□□□ -0.11
SNRPA1-202ENST00000394082 RNASEK-C17orf49H0YIS7 233 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 M0R1W7 72 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 CDIPTO14735 213 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 CST4P01036 141 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 CAV3P56539 151 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 GNGT1P63211 74 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 NCR3LG1Q68D85 454 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 DHRS7BQ6IAN0 325 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 ZNF788Q6ZQV5 615 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 FAM57BQ71RH2 274 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms