RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 RPS10P46783 165 aaKnown RBP11.3□□□□□ -0.6
CLTC-202ENST00000393043 ZFP36L2P47974 494 aaKnown RBP11.3□□□□□ -0.6
CLTC-202ENST00000393043 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 RTN4IP1Q8WWV3 396 aaPredicted RBP11.3□□□□□ -0.6
CLTC-202ENST00000393043 ZNF275Q9NSD4 429 aaPredicted RBP11.3□□□□□ -0.6
CLTC-202ENST00000393043 KPTNQ9Y664 436 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 MEIKINA0A087WXM9 373 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 PYCARD-AS1I3L0S3 204 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 FUT3P21217 361 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 RPL12P30050 165 aaKnown RBP11.3□□□□□ -0.6
CLTC-202ENST00000393043 INSL4Q14641 139 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 TMEM268Q5VZI3 342 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 OR2Y1Q8NGV0 311 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 MIA3Q5JRA6 1907 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 TCRBV16S1A1N1A0A5B0 115 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 IGHV4-34P06331 123 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 NFYBP25208 207 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 NLRC3Q7RTR2 1065 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 NPEPL1Q8NDH3 523 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 ZNF680Q8NEM1 530 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
CLTC-202ENST00000393043 TMEM272A0A1B0GTI8 110 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 RER1O15258 196 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 FAM157BP0CG42 384 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 PIGPP57054 158 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 RAB1AP62820 205 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 FAM234AQ9H0X4 552 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 MRPS18AQ9NVS2 196 aaKnown RBP11.29□□□□□ -0.6
CLTC-202ENST00000393043 STRAPQ9Y3F4 350 aaKnown RBP11.29□□□□□ -0.6
CLTC-202ENST00000393043 WDR1O75083 606 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 SCAF4O95104 1147 aaKnown RBP11.29□□□□□ -0.6
CLTC-202ENST00000393043 PI3P19957 117 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 M6PRP20645 277 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 MESP2Q0VG99 397 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 KISS1Q15726 138 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 Q8IYB0 196 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 SLC23A1Q9UHI7 598 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
CLTC-202ENST00000393043 SCN10AQ9Y5Y9 1956 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 FAM221AA4D161 298 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 ANKRD34BA5PLL1 514 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 LRP3O75074 770 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 CTAG2O75638 210 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 TPPPO94811 219 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 GP1BAP07359 652 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 PSMB3P49720 205 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 SKP2Q13309 424 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 GSG1Q2KHT4 349 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 PRAMEF5Q5TYX0 476 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 PRAMEF6Q5VXH4 476 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 SLC38A6Q8IZM9 456 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 C1orf87Q8N0U7 546 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 ZNF321PQ8N8H1 164 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 OR11G2Q8NGC1 345 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 PTPMT1Q8WUK0 201 aaPredicted RBP11.29□□□□□ -0.6
CLTC-202ENST00000393043 ASB10Q8WXI3 467 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 SUCNR1Q9BXA5 334 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 SMCO4Q9NRQ5 59 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 CACFD1Q9UGQ2 172 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 MRM2Q9UI43 246 aaKnown RBP11.29□□□□□ -0.6
CLTC-202ENST00000393043 NDUFB7P17568 137 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 BAP18Q8IXM2 172 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 TM4SF19Q96DZ7 209 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 LAMP3Q9UQV4 416 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 CRYABP02511 175 aaKnown RBP11.29□□□□□ -0.6
CLTC-202ENST00000393043 H2AFB1P0C5Y9 115 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 CT45A8P0DMV1 189 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 CT45A9P0DMV2 189 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 RPA2P15927 270 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 FPR2P25090 351 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 CT45A2Q5DJT8 189 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 ZNF766Q5HY98 468 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 CDH26Q8IXH8 852 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 PPP1R1CQ8WVI7 109 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 PTP4A1Q93096 173 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
CLTC-202ENST00000393043 RASL10BQ96S79 203 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 LHX9Q9NQ69 397 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 RNF150Q9ULK6 438 aa11.29□□□□□ -0.6
CLTC-202ENST00000393043 ZNF638Q14966 1978 aaKnown RBP11.28□□□□□ -0.6
CLTC-202ENST00000393043 GPANK1O95872 356 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 HIST1H1DP16402 221 aaKnown RBP11.28□□□□□ -0.6
CLTC-202ENST00000393043 EXOSC2Q13868 293 aaKnown RBP11.28□□□□□ -0.6
CLTC-202ENST00000393043 C16orf47Q6ZP98 133 aaPredicted RBP11.28□□□□□ -0.6
CLTC-202ENST00000393043 SPRED2Q7Z698 418 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 CDC20BQ86Y33 519 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 KISS1RQ969F8 398 aaPredicted RBP11.28□□□□□ -0.6
CLTC-202ENST00000393043 MARVELD1Q9BSK0 173 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 FOXS1O43638 330 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 CYC1P08574 325 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 GPR12P47775 334 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 GNG3P63215 75 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 MESTQ5EB52 335 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 RBMXL3Q8N7X1 1067 aaKnown RBP11.28□□□□□ -0.6
CLTC-202ENST00000393043 MED30Q96HR3 178 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 C10orf90Q96M02 699 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 TINAGL1Q9GZM7 467 aaPredicted RBP11.28□□□□□ -0.6
CLTC-202ENST00000393043 ARV1Q9H2C2 271 aa11.28□□□□□ -0.6
CLTC-202ENST00000393043 SPRY1O43609 319 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms