RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 MPZL1O95297 269 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 GLP1RP43220 463 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 SLC17A1Q14916 467 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 GPR119Q8TDV5 335 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF501Q96CX3 271 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 OR10C1Q96KK4 312 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 METTL8Q9H825 291 aaKnown RBP15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 SPACA1Q9HBV2 294 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 TIMM10BQ9Y5J6 103 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 A0A1B0GX78 115 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 MED19A0JLT2 244 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 FAM157AC9JC47 383 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 XKRYO14609 159 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 SLC6A8P48029 635 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 EGR3Q06889 387 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 CLEC9AQ6UXN8 241 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 ZDHHC22Q8N966 263 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 OTOSQ8NHW6 89 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 OCSTAMPQ9BR26 566 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 NMES1Q9C002 83 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 TOLLIPQ9H0E2 274 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 TMPRSS5Q9H3S3 457 aa15.69■□□□□ 0.1
SQSTM1-202ENST00000389805 TRBV6-7A0A0A0MS04 114 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 PPIHO43447 177 aaKnown RBP15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 INSM1Q01101 510 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 PYY3Q5JQD4 70 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 SLC25A43Q8WUT9 341 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 SAT2Q96F10 170 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF587Q96SQ5 575 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 ASH2LQ9UBL3 628 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 DBX1A6NMT0 343 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 GPR37O15354 613 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 BCAT2O15382 392 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 GLB1P16278 677 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 CTLA4P16410 223 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 PGCP20142 388 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 DVL1P1P54792 670 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF260Q3ZCT1 412 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 EMC4Q5J8M3 183 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 OR2A2Q6IF42 318 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 BTNL8Q6UX41 500 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF383Q8NA42 475 aa15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF775Q96BV0 537 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-202ENST00000389805 NME2P1O60361 137 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 TIAF1O95411 115 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 HOXB5P09067 269 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 FBXW4P57775 412 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 MAMDC2Q7Z304 686 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 OR13C3Q8NGS6 347 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 ASB17Q8WXJ9 295 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 OR8B4Q96RC9 309 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 SLC5A7Q9GZV3 580 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 MRPL22Q9NWU5 206 aaKnown RBP15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 GDF2Q9UK05 429 aaPredicted RBP15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 DMRT1Q9Y5R6 373 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 RAB27BO00194 218 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 OR6A2O95222 327 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 SFTPBP07988 381 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 DCAF7P61962 342 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 WDFY1Q8IWB7 410 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 STT3BQ8TCJ2 826 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 CD300LFQ8TDQ1 290 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 SLC2A8Q9NY64 477 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 TMEM14AQ9Y6G1 99 aa15.67■□□□□ 0.1
SQSTM1-202ENST00000389805 PRSS37A4D1T9 235 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 SHISA8B8ZZ34 492 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 HTR5AP47898 357 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 CX3CR1P49238 355 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 C1orf140Q5VVS0 124 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 PRSS54Q6PEW0 395 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 CLEC18BQ6UXF7 455 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 COX15Q7KZN9 410 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 AQP3Q92482 292 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 EIF5A2Q9GZV4 153 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 FSCN3Q9NQT6 498 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 KPTNQ9Y664 436 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 CEP192Q8TEP8 1941 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 STARD6P59095 220 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 PTCRAQ6ISU1 281 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF574Q6ZN55 896 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 EMC9Q9Y3B6 208 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 ADAM10O14672 748 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 RPL27P61353 136 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 RNF4P78317 190 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 CYCSP99999 105 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF616Q08AN1 781 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 FAM69BQ5VUD6 431 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF441Q8N8Z8 693 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 SLAMF9Q96A28 289 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 VDAC3Q9Y277 283 aa15.66■□□□□ 0.1
SQSTM1-202ENST00000389805 LOC101059948A0A1B0GTJ6 334 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 PHYHO14832 338 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 NPIPB7O75200 414 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 IFNA2P01563 188 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 CSTBP04080 98 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 PAX6P26367 422 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 SLC6A9P48067 706 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 AFF3P51826 1226 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 SGCBQ16585 318 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms