RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 A0A0A6YYJ9 748 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 SS18L1O75177 396 aaPredicted RBP17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 IL18BPO95998 194 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 FCER2P06734 321 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 CSF1P09603 554 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 H2AFB2P0C5Z0 115 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 PSMB1P20618 241 aaKnown RBP17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 CCNOP22674 350 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 MPGP29372 298 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 PTGFRP43088 359 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 VEGFCP49767 419 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 ATAD3CQ5T2N8 411 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 PNLDC1Q8NA58 520 aaKnown RBP17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 OR5M9Q8NGP3 310 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 SNIP1Q8TAD8 396 aaKnown RBP17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 KCNG3Q8TAE7 436 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 PIGTQ969N2 578 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 PLSCR2Q9NRY7 297 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 GLRX2Q9NS18 164 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 GPR173Q9NS66 373 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 ZNF221Q9UK13 617 aa17.25■□□□□ 0.35
PDLIM5-205ENST00000380180 DCHS1Q96JQ0 3298 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 LAMA5O15230 3695 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 TMEM235A6NFC5 223 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 LPLP06858 475 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 CCL2P13500 99 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 ARR3P36575 388 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 GSK3AP49840 483 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 FAM3AP98173 230 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 SSBP1Q04837 148 aaKnown RBP17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 ZNF260Q3ZCT1 412 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 COLCA1Q6ZS62 124 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 C1QL2Q7Z5L3 287 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 CHST4Q8NCG5 386 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 OR1K1Q8NGR3 316 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 SARAFQ96BY9 339 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 NICN1Q9BSH3 213 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 BANF2Q9H503 90 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 SCPEP1Q9HB40 452 aa17.24■□□□□ 0.35
PDLIM5-205ENST00000380180 hCG_38984A0A1B0GV85 526 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 A0A1W2PP11 408 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 C5orf49A4QMS7 147 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 CDC14BO60729 498 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 MPIG6BO95866 241 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 COX5BP10606 129 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 GTF2F2P13984 249 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 STOMP27105 288 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 HIKESHIQ53FT3 197 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 FGD2Q7Z6J4 655 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 GCNT2Q8N0V5 402 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 OR56B4Q8NH76 319 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 DEDD2Q8WXF8 326 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 AQP3Q92482 292 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 LPAR5Q9H1C0 372 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 NKIRAS2Q9NYR9 191 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 MGAQ8IWI9 3026 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 XRCC2O43543 280 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 PDGFAP04085 211 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 UBBP0CG47 229 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 CDNFQ49AH0 187 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 SLC22A6Q4U2R8 563 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 Q6ZTK2 550 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 OR4D10Q8NGI6 311 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 OR4C16Q8NGL9 310 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 AKAP1Q92667 903 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 BEX2Q9BXY8 128 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 C20orf85Q9H1P6 137 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 POU2F3Q9UKI9 436 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 FLVCR2Q9UPI3 526 aa17.23■□□□□ 0.35
PDLIM5-205ENST00000380180 INTS1Q8N201 2190 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 SCGNO76038 276 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 NAT2P11245 290 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 FAUP35544 74 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 ALDH3B1P43353 468 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 RAG2P55895 527 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 ACTBP60709 375 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 RRAS2P62070 204 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 ACTG1P63261 375 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 TMEM53Q6P2H8 277 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 OR10R2Q8NGX6 335 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 BCL2L2Q92843 193 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 SPSB4Q96A44 273 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 TMEM59Q9BXS4 323 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 ACTR6Q9GZN1 396 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 GHITMQ9H3K2 345 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 RANGRFQ9HD47 186 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 ING4Q9UNL4 249 aa17.22■□□□□ 0.35
PDLIM5-205ENST00000380180 A0A0A6YYD4 124 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 C7orf66A4D0T2 115 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 CRTAPO75718 401 aaPredicted RBP17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 CD3DP04234 171 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 CD83Q01151 205 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 OR8B8Q15620 311 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 GSG1Q2KHT4 349 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 LINC00303Q3SY05 128 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 OR8S1Q8NH09 359 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 TNFAIP8L1Q8WVP5 186 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 DVL3Q92997 716 aaPredicted RBP17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 SELENOIQ9C0D9 397 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 TP63Q9H3D4 680 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms