RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CD3DP04234 171 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 CSNK2A1P68400 391 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-202ENST00000379996 STK11Q15831 433 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 ABLIM2Q6H8Q1 611 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 ZNF813Q6ZN06 617 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 C20orf204Q6ZNR8 217 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 TMPPEQ6ZT21 453 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 OR51A2Q8NGJ7 313 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 PCNPQ8WW12 178 aaKnown RBP6.78□□□□□ -1.32
CDKL5-202ENST00000379996 EXTL1Q92935 676 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 RBPMSQ93062 196 aaKnown RBP6.78□□□□□ -1.32
CDKL5-202ENST00000379996 C1orf147Q96MC9 270 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-202ENST00000379996 ZNF69Q9UC07 566 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 PLEKHA6Q9Y2H5 1048 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 MAB21L2Q9Y586 359 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 R4GMQ9 66 aa6.78□□□□□ -1.32
CDKL5-202ENST00000379996 FREM3P0C091 2139 aa6.77□□□□□ -1.32
CDKL5-202ENST00000379996 A0A0A6YYH2 397 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 A6NJ64 397 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 ZSCAN5BA6NJL1 495 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 AQP7P3A6NL99 342 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 MPZL1O95297 269 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 AKAIN1P0CW23 69 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 MAGEA5P43359 124 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 TDGF1P3P51864 188 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 RAC3P60763 192 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 UNC119Q13432 240 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 PDSS1Q5T2R2 415 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 TMUB2Q71RG4 321 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 GABRG1Q8N1C3 465 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 OR51S1Q8NGJ8 323 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 OR6K3Q8NGY3 331 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 OR14L1PQ8NHC6 308 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 SUN5Q8TC36 379 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 ELMOD3Q96FG2 381 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 LINC00052Q96N35 136 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 NUDT16L1Q9BRJ7 211 aaKnown RBP6.77□□□□□ -1.33
CDKL5-202ENST00000379996 COMMD4Q9H0A8 199 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 SLITRK2Q9H156 845 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 NKIRAS2Q9NYR9 191 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 TAS2R4Q9NYW5 299 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 B3GAT1Q9P2W7 334 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 VDAC3Q9Y277 283 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF175Q9Y473 711 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 ANXA2P2A6NMY6 339 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 K7EM74 188 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 VAMP5O95183 116 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 LPLP06858 475 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 ANXA2P07355 339 aaKnown RBP6.77□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF35P13682 527 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 PLGLB1Q02325 96 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 KLRB1Q12918 225 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 MYBPHQ13203 477 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 RAB11BQ15907 218 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF260Q3ZCT1 412 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 TFAP2EQ6VUC0 442 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 C3P1Q6ZMU1 363 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 SLC35D2Q76EJ3 337 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 CPNE4Q96A23 557 aaPredicted RBP6.77□□□□□ -1.33
CDKL5-202ENST00000379996 TAAR6Q96RI8 345 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 NKX3-1Q99801 234 aaPredicted RBP6.77□□□□□ -1.33
CDKL5-202ENST00000379996 GINS4Q9BRT9 223 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 MRPL13Q9BYD1 178 aaKnown RBP6.77□□□□□ -1.33
CDKL5-202ENST00000379996 SCPEP1Q9HB40 452 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 SLC5A6Q9Y289 635 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 PIEZO1Q92508 2521 aa6.77□□□□□ -1.33
CDKL5-202ENST00000379996 IGKV3D-15A0A087WSY6 115 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 TRGV5A0A0B4J1U4 118 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 DBX1A6NMT0 343 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 S100A11P31949 105 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 PTGER4P35408 488 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 GPR85P60893 370 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 PLEKHN1Q494U1 663 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 ATPAF1Q5TC12 328 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 RAET1LQ5VY80 246 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 OR2V1Q8NHB1 315 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 WDR13Q9H1Z4 485 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 IFT22Q9H7X7 185 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 CHST11Q9NPF2 352 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 RFPL4AA6NLU0 287 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 FOXI3A8MTJ6 420 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 RFPL4AL1F8VTS6 287 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 RBBP9O75884 186 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 IGLV3-1P01715 115 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF133P52736 654 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 SUCLG1P53597 346 aaKnown RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 CLDN15P56746 228 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 MELKQ14680 651 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 SLC18B1Q6NT16 456 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 STEAP1BQ6NZ63 245 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 PCSK4Q6UW60 755 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 H1FNTQ75WM6 255 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-202ENST00000379996 RTN4RL2Q86UN3 420 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF676Q8N7Q3 588 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 OR4D6Q8NGJ1 314 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 SCARB1Q8WTV0 552 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 RNF133Q8WVZ7 376 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM45BQ96B21 275 aa6.76□□□□□ -1.33
CDKL5-202ENST00000379996 WDYHV1Q96HA8 205 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms