RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 AKAP1Q92667 903 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB3IP-204ENST00000378815 SEH1LQ96EE3 360 aa13.37□□□□□ -0.27
RAB3IP-204ENST00000378815 NUDT16L1Q9BRJ7 211 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-204ENST00000378815 WASF3Q9UPY6 502 aa13.37□□□□□ -0.27
RAB3IP-204ENST00000378815 TNRC6AQ8NDV7 1962 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 SCGNO76038 276 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 LPLP06858 475 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 NAT2P11245 290 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 STOMP27105 288 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 PTGFRP43088 359 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 OR8B8Q15620 311 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 PCGF3Q3KNV8 242 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 TMEM53Q6P2H8 277 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 BTN2A1Q7KYR7 527 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 FAM214BQ7L5A3 538 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 PNLDC1Q8NA58 520 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 TMEM104Q8NE00 496 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 AQP3Q92482 292 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 SPSB1Q96BD6 273 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 GHRLQ9UBU3 117 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 FRYQ5TBA9 3013 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 TRAV6A0A075B6T7 132 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 GFRA3O60609 400 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 CSF1P09603 554 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 EIF2B2P49770 351 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 HIKESHIQ53FT3 197 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 ZNF584Q8IVC4 421 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 GCNT2Q8N0V5 402 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 RBMXL3Q8N7X1 1067 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 WNT2BQ93097 391 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 GPR173Q9NS66 373 aa13.36□□□□□ -0.27
RAB3IP-204ENST00000378815 C5orf49A4QMS7 147 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 OR14I1A6ND48 311 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 K7EM74 188 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 CDC14BO60729 498 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 RAG2P55895 527 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 PRSS12P56730 875 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 ZNF260Q3ZCT1 412 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 SFRP4Q6FHJ7 346 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 PIGTQ969N2 578 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 ST6GAL2Q96JF0 529 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 RNF170Q96K19 258 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 POM121L2Q96KW2 1035 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 LPAR5Q9H1C0 372 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 ZMAT3Q9HA38 289 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 MEIS3P1A6NDR6 274 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 AHRRA9YTQ3 701 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 DHFRP00374 187 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 ACSF3Q4G176 576 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 CLVS2Q5SYC1 327 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 C1QL2Q7Z5L3 287 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 C9orf106Q8NAJ2 232 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 CMBLQ96DG6 245 aa13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 ELF5Q9UKW6 265 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-204ENST00000378815 ARHGAP21Q5T5U3 1957 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 A0A0A6YYD4 124 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 TMEM235A6NFC5 223 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 MPIG6BO95866 241 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 CHRM2P08172 466 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 MELTFP08582 738 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 CCL2P13500 99 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 PSMB1P20618 241 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 EIF2S3P41091 472 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 VEGFCP49767 419 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 ACTBP60709 375 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 ACTG1P63261 375 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 PLP2Q04941 152 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 TBRG1Q3YBR2 411 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 FAAP20Q6NZ36 180 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 RPUSD3Q6P087 351 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 OR5D18Q8NGL1 313 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 OR10R2Q8NGX6 335 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 OR56B4Q8NH76 319 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 NICN1Q9BSH3 213 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 ACTR6Q9GZN1 396 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 MCUBQ9NWR8 336 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 URB1O60287 2271 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 C7orf66A4D0T2 115 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 H2AFB2P0C5Z0 115 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 CCNOP22674 350 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 FAUP35544 74 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 KIR2DL2P43627 348 aaPredicted RBP13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 CNN3Q15417 329 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 GSG1Q2KHT4 349 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 SLC22A6Q4U2R8 563 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 Q6ZTK2 550 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 CDH24Q86UP0 819 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 OR4C16Q8NGL9 310 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 TNFAIP8L1Q8WVP5 186 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 NANOS1Q8WY41 292 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 TMEM59Q9BXS4 323 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 C20orf85Q9H1P6 137 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 BANF2Q9H503 90 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 LHX6Q9UPM6 363 aa13.34□□□□□ -0.27
RAB3IP-204ENST00000378815 MED12LQ86YW9 2145 aa13.33□□□□□ -0.28
RAB3IP-204ENST00000378815 A0A0A6YYJ9 748 aa13.33□□□□□ -0.28
RAB3IP-204ENST00000378815 A0A1W2PP11 408 aa13.33□□□□□ -0.28
RAB3IP-204ENST00000378815 CNOT4O95628 575 aaKnown RBP13.33□□□□□ -0.28
RAB3IP-204ENST00000378815 NRASP01111 189 aa13.33□□□□□ -0.28
RAB3IP-204ENST00000378815 PRKACBP22694 351 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms