RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 GINS4Q9BRT9 223 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 MOB1AQ9H8S9 216 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 STEAP1Q9UHE8 339 aa17.04■□□□□ 0.32
SSU72-204ENST00000378726 NCOA6Q14686 2063 aaPredicted RBP17.03■□□□□ 0.32
SSU72-204ENST00000378726 DNAJC13O75165 2243 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 TRGV5A0A0B4J1U4 118 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 H7C417 338 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 XRCC3O43542 346 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 RBBP9O75884 186 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 NMBP08949 121 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 IL32P24001 234 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 CTSSP25774 331 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 RIPPLY2Q5TAB7 128 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 TMUB2Q71RG4 321 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 TMEM38BQ9NVV0 291 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 MTFP1Q9UDX5 166 aa17.03■□□□□ 0.32
SSU72-204ENST00000378726 TSPAN4O14817 238 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 FCER2P06734 321 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 ZP3P21754 424 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 GUCA2AQ02747 115 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 CEACAM16Q2WEN9 425 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 BIVMQ86UB2 503 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 TUSC5Q8IXB3 177 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 PLPP7Q8NBV4 271 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 OR8B12Q8NGG6 310 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 C15orf40Q8WUR7 153 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 GPR35Q9HC97 309 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 ZNF319Q9P2F9 582 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 OPN4Q9UHM6 478 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 A0A1B0GTI1 187 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 MEIS3P1A6NDR6 274 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 F5H5K5 113 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 EFSO43281 561 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 RLN1P04808 185 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 ZNF35P13682 527 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 FSTP19883 344 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 S100A11P31949 105 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 PMP22Q01453 160 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 RBMS2Q15434 407 aaKnown RBP17.02■□□□□ 0.32
SSU72-204ENST00000378726 FAM57BQ71RH2 274 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 NAA40Q86UY6 237 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 KCNK15Q9H427 330 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 ZDHHC11Q9H8X9 412 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 CALHM2Q9HA72 323 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 PARPBPQ9NWS1 579 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 PLEK2Q9NYT0 353 aa17.02■□□□□ 0.32
SSU72-204ENST00000378726 IGHV3-9P01782 118 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 ITGA5P08648 1049 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 TUSC1Q2TAM9 212 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 TSPO2Q5TGU0 170 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 DCAF12L2Q5VW00 463 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 GLT8D1Q68CQ7 371 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 OR51A2Q8NGJ7 313 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 DMRTA2Q96SC8 542 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 FOXB1Q99853 325 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 UBE2QL1A1L167 161 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 MEGF11A6BM72 1044 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 TTLL8A6PVC2 850 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 GOSR2O14653 212 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 B3GALNT1O75752 331 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 LPLP06858 475 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 CST2P09228 141 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 SPOCK1Q08629 439 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 RSPO1Q2MKA7 263 aaPredicted RBP17.01■□□□□ 0.31
SSU72-204ENST00000378726 MUC20Q8N307 709 aaPredicted RBP17.01■□□□□ 0.31
SSU72-204ENST00000378726 OR51D1Q8NGF3 324 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 SLCO5A1Q9H2Y9 848 aa17.01■□□□□ 0.31
SSU72-204ENST00000378726 CDV3Q9UKY7 258 aaKnown RBP17.01■□□□□ 0.31
SSU72-204ENST00000378726 FXYD6-FXYD2A0A087WZ82 144 aa17■□□□□ 0.31
SSU72-204ENST00000378726 DCDC2BA2VCK2 349 aa17■□□□□ 0.31
SSU72-204ENST00000378726 GGT3PA6NGU5 568 aa17■□□□□ 0.31
SSU72-204ENST00000378726 TEX46H3BTG2 121 aa17■□□□□ 0.31
SSU72-204ENST00000378726 CTAG2O75638 210 aa17■□□□□ 0.31
SSU72-204ENST00000378726 RP2O75695 350 aa17■□□□□ 0.31
SSU72-204ENST00000378726 B4GALT1P15291 398 aa17■□□□□ 0.31
SSU72-204ENST00000378726 ANOS1P23352 680 aa17■□□□□ 0.31
SSU72-204ENST00000378726 FAUP35544 74 aaKnown RBP17■□□□□ 0.31
SSU72-204ENST00000378726 ABHD12BQ7Z5M8 362 aaPredicted RBP17■□□□□ 0.31
SSU72-204ENST00000378726 COMMD2Q86X83 199 aa17■□□□□ 0.31
SSU72-204ENST00000378726 OR2AK2Q8NG84 335 aa17■□□□□ 0.31
SSU72-204ENST00000378726 OR1J2Q8NGS2 313 aa17■□□□□ 0.31
SSU72-204ENST00000378726 ADAT3Q96EY9 351 aaPredicted RBP17■□□□□ 0.31
SSU72-204ENST00000378726 WDYHV1Q96HA8 205 aa17■□□□□ 0.31
SSU72-204ENST00000378726 NKX3-1Q99801 234 aaPredicted RBP17■□□□□ 0.31
SSU72-204ENST00000378726 FXYD6Q9H0Q3 95 aa17■□□□□ 0.31
SSU72-204ENST00000378726 GPR84Q9NQS5 396 aa17■□□□□ 0.31
SSU72-204ENST00000378726 SPRR3Q9UBC9 169 aa17■□□□□ 0.31
SSU72-204ENST00000378726 URB1O60287 2271 aaKnown RBP17■□□□□ 0.31
SSU72-204ENST00000378726 HMSDA8MTL9 139 aa17■□□□□ 0.31
SSU72-204ENST00000378726 ATP6V1G2-DDX39BF2Z307 99 aa17■□□□□ 0.31
SSU72-204ENST00000378726 LGALS8O00214 317 aa17■□□□□ 0.31
SSU72-204ENST00000378726 SLC17A2O00624 439 aa17■□□□□ 0.31
SSU72-204ENST00000378726 CFPP27918 469 aa17■□□□□ 0.31
SSU72-204ENST00000378726 GNALP38405 381 aa17■□□□□ 0.31
SSU72-204ENST00000378726 ANKRD16Q6P6B7 361 aa17■□□□□ 0.31
SSU72-204ENST00000378726 SLC22A24Q8N4F4 322 aa17■□□□□ 0.31
SSU72-204ENST00000378726 OR6M1Q8NGM8 313 aa17■□□□□ 0.31
SSU72-204ENST00000378726 SOX7Q9BT81 388 aa17■□□□□ 0.31
SSU72-204ENST00000378726 CHST6Q9GZX3 395 aa17■□□□□ 0.31
SSU72-204ENST00000378726 ARL6Q9H0F7 186 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms