RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 RRNAD1Q96FB5 475 aaKnown RBP9.4□□□□□ -0.9
ABCF1-202ENST00000376545 LRRC46Q96FV0 321 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 TMEM59Q9BXS4 323 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 ASH2LQ9UBL3 628 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 GHRLQ9UBU3 117 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 CSAG2Q9Y5P2 127 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 RER1O15258 196 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 APOC3P02656 99 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 PGAM2P15259 253 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 RPS2P15880 293 aaKnown RBP9.4□□□□□ -0.9
ABCF1-202ENST00000376545 VAMP1P23763 118 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 PABPC1L2AQ5JQF8 200 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 KCTD9Q7L273 389 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 SLC16A14Q7RTX9 510 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 LYZL4Q96KX0 146 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 SPACA5Q96QH8 159 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 SEC61A2Q9H9S3 476 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 PCDHB10Q9UN67 800 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 V9GYS6 101 aa9.4□□□□□ -0.9
ABCF1-202ENST00000376545 ARID1BQ8NFD5 2236 aaPredicted RBP9.4□□□□□ -0.9
ABCF1-202ENST00000376545 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 EEF1E1-BLOC1S5C9J1V9 151 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 RAMP1O60894 148 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 CA11O75493 328 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 OR2J2O76002 312 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 MPIG6BO95866 241 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 QDPRP09417 244 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 ZNF84P51523 738 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 STARD6P59095 220 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 ECH1Q13011 328 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 C10orf128Q5T292 105 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 ELP2Q6IA86 826 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 CLEC18BQ6UXF7 455 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 CCDC36Q8IYA8 594 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 ZSCAN4Q8NAM6 433 aaPredicted RBP9.4□□□□□ -0.91
ABCF1-202ENST00000376545 OR1S2Q8NGQ3 325 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 CASTOR1Q8WTX7 329 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 ARHGAP5-AS1Q96IT6 56 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 OR6C1Q96RD1 312 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 TM2D1Q9BX74 207 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 FLVCR1Q9Y5Y0 555 aa9.4□□□□□ -0.91
ABCF1-202ENST00000376545 LY6G6EA0A0G2JKS1 128 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 A0A0U1RQV5 110 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 A0A1W2PNR3 127 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 A0A1W2PP11 408 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 NUDT19A8MXV4 375 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 FAM25EA8MYX2 175 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 F5H0A9 414 aaPredicted RBP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 FAM157CP0CG43 387 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 EIF1P41567 113 aaKnown RBP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 MC2RQ01718 297 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 ATXN7L3Q14CW9 347 aaPredicted RBP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 OR13G1Q8NGZ3 307 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 CYYR1Q96J86 154 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 SCGB3A2Q96PL1 93 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 U3KQA8 63 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 SCRG1O75711 98 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 ATG12O94817 140 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 POLR2GP62487 172 aaKnown RBP eCLIP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 ZNF169Q14929 603 aaPredicted RBP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 FAM69BQ5VUD6 431 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 PRSS54Q6PEW0 395 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 DRAM2Q6UX65 266 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 Q7L0L9 218 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 OR5T2Q8NGG2 359 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 TMEM54Q969K7 222 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 SPACA9Q96E40 222 aaPredicted RBP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 AQP10Q96PS8 301 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 OR5B2Q96R09 309 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 RASL10BQ96S79 203 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 NKX6-2Q9C056 277 aaPredicted RBP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 BANF2Q9H503 90 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 METTL7AQ9H8H3 244 aa9.39□□□□□ -0.91
ABCF1-202ENST00000376545 ATXN7L1Q9ULK2 861 aaPredicted RBP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 CHCHD2Q9Y6H1 151 aaPredicted RBP9.39□□□□□ -0.91
ABCF1-202ENST00000376545 TMEM218A2RU14 115 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 SLC2A1P11166 492 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 ZNF43P17038 809 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 KLK2P20151 261 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 OTX1P32242 354 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 SGCAQ16586 387 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 RSPO1Q2MKA7 263 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 LCN10Q6JVE6 187 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 MRPL14Q6P1L8 145 aaKnown RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 TMPPEQ6ZT21 453 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 ARMC10Q8N2F6 343 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 TMEM41AQ96HV5 264 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 URM1Q9BTM9 101 aaKnown RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 OR10A2Q9H208 303 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 SLC6A15Q9H2J7 730 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 MRPS17Q9Y2R5 130 aaKnown RBP9.38□□□□□ -0.91
ABCF1-202ENST00000376545 EML6Q6ZMW3 1958 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 KIAA1549Q9HCM3 1950 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 C5orf63A6NC05 138 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 C5orf51A6NDU8 294 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 KCNAB3O43448 404 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 NDUFA2O43678 99 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 THBS4P35443 961 aa9.38□□□□□ -0.91
ABCF1-202ENST00000376545 PTGFRP43088 359 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms