RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 HLA-DQA2P01906 255 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 TBPP20226 339 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 HSPB2Q16082 182 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 IAH1Q2TAA2 248 aaPredicted RBP18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 C12orf76Q8N812 135 aaPredicted RBP18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 OR13C3Q8NGS6 347 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 PRRX2Q99811 253 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 SNHG12Q9BXW3 62 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 WFDC1Q9HC57 220 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 DOCK9Q9BZ29 2069 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 H0YL77 283 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 K7EQS6 105 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 DLK1P80370 383 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 HAGHQ16775 308 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 PCK2Q16822 640 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 LCN10Q6JVE6 187 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 LANCL3Q6ZV70 420 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 LRRC18Q8N456 261 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 TSPAN32Q96QS1 320 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 LPAR4Q99677 370 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 HIF3AQ9Y2N7 669 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 LSM5Q9Y4Y9 91 aaKnown RBP18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.27■□□□□ 0.52
TMEFF1-201ENST00000374879 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.27■□□□□ 0.52
TMEFF1-201ENST00000374879 MEGF11A6BM72 1044 aa18.27■□□□□ 0.52
TMEFF1-201ENST00000374879 FAM221BA6H8Z2 402 aa18.27■□□□□ 0.52
TMEFF1-201ENST00000374879 DEDDO75618 318 aa18.27■□□□□ 0.52
TMEFF1-201ENST00000374879 RAB4AP20338 218 aa18.27■□□□□ 0.52
TMEFF1-201ENST00000374879 LYPD6Q86Y78 171 aa18.27■□□□□ 0.52
TMEFF1-201ENST00000374879 OR13D1Q8NGV5 346 aa18.27■□□□□ 0.52
TMEFF1-201ENST00000374879 FGF17O60258 216 aa18.27■□□□□ 0.51
TMEFF1-201ENST00000374879 DRD3P35462 400 aa18.27■□□□□ 0.51
TMEFF1-201ENST00000374879 HIKESHIQ53FT3 197 aa18.27■□□□□ 0.51
TMEFF1-201ENST00000374879 MARCH3Q86UD3 253 aa18.27■□□□□ 0.51
TMEFF1-201ENST00000374879 TMEM156Q8N614 296 aa18.27■□□□□ 0.51
TMEFF1-201ENST00000374879 OR52E1Q8NGJ3 308 aa18.27■□□□□ 0.51
TMEFF1-201ENST00000374879 OR9A4Q8NGU2 314 aa18.27■□□□□ 0.51
TMEFF1-201ENST00000374879 A0A087WWC5 75 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 RPS2P15880 293 aaKnown RBP18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 S1PR1P21453 382 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 APCDD1LQ8NCL9 501 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 OR10J5Q8NHC4 309 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 Q9N2J8 555 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 HSD17B6O14756 317 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 GMFGO60234 142 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 TLX1P31314 330 aaPredicted RBP18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 CCL20P78556 96 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 SLC10A1Q14973 349 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 ZNHIT3Q15649 155 aaPredicted RBP18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 PRICKLE4Q2TBC4 344 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 SNX22Q96L94 193 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 DAPP1Q9UN19 280 aa18.26■□□□□ 0.51
TMEFF1-201ENST00000374879 CEACAM18A8MTB9 384 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 APOBEC1P41238 236 aaKnown RBP18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 ZNF74Q16587 644 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 CATSPERDQ86XM0 798 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 TMEM52Q8NDY8 209 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 DNAJA3Q96EY1 480 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 NICN1Q9BSH3 213 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 TMEM269A0A1B0GVZ9 245 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 ZNF705GA8MUZ8 300 aaPredicted RBP18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 DVL1O14640 695 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 NKX2-2O95096 273 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 RENP00797 406 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 PGA4P0DJD7 388 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 PGA5P0DJD9 388 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 OR5H8P0DN80 308 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 VSIG8P0DPA2 414 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 FPR2P25090 351 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 WASP42768 502 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 MGAT2Q10469 447 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 COL13A1Q5TAT6 717 aaPredicted RBP18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 FAM213BQ8TBF2 198 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 EYSQ5T1H1 3165 aa18.25■□□□□ 0.51
TMEFF1-201ENST00000374879 TLCD2A6NGC4 264 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 CXCR1P25024 350 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 RPL18Q07020 188 aaKnown RBP18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 AGBL4Q5VU57 503 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 SLC22A25Q6T423 547 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 PEG10Q86TG7 708 aaKnown RBP18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 GPR137CQ8N3F9 429 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 GINS3Q9BRX5 216 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 RCL1Q9Y2P8 373 aaKnown RBP18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 SCGB1D2O95969 90 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 PSG6Q00889 435 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 HSD17B11Q8NBQ5 300 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 OR52R1Q8NGF1 315 aa18.24■□□□□ 0.51
TMEFF1-201ENST00000374879 A0A1B0GW64 132 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 ATXN7O15265 892 aaPredicted RBP18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 GIMD1P0DJR0 217 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 AFF3P51826 1226 aaKnown RBP18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 SUCLG1P53597 346 aaKnown RBP18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 QRFPP83859 136 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 ACY1Q03154 408 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 VAX1Q5SQQ9 334 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 Q7L0L9 218 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 OR13G1Q8NGZ3 307 aa18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 ANKRD9Q96BM1 317 aaPredicted RBP18.23■□□□□ 0.51
TMEFF1-201ENST00000374879 VSX1Q9NZR4 365 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms