RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 OR10R2Q8NGX6 335 aa10.62□□□□□ -0.71
HMGCL-202ENST00000374487 KCNG3Q8TAE7 436 aa10.62□□□□□ -0.71
HMGCL-202ENST00000374487 SFXN2Q96NB2 322 aa10.62□□□□□ -0.71
HMGCL-202ENST00000374487 OR2A7Q96R45 310 aa10.62□□□□□ -0.71
HMGCL-202ENST00000374487 ALX4Q9H161 411 aaPredicted RBP10.62□□□□□ -0.71
HMGCL-202ENST00000374487 PLEK2Q9NYT0 353 aa10.62□□□□□ -0.71
HMGCL-202ENST00000374487 IGSF10Q6WRI0 2623 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 TMEM14DPA8MWL7 114 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 G3V3Q6 166 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 GOSR2O14653 212 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 SMAD9O15198 467 aaKnown RBP10.61□□□□□ -0.71
HMGCL-202ENST00000374487 MPIG6BO95866 241 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 F10P00742 488 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 APOC1P02654 83 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 CD74P04233 296 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 CHRM2P08172 466 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 MELTFP08582 738 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 ANOS1P23352 680 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 OR3A4PP47883 348 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 GSK3AP49840 483 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 UCNP55089 124 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 H3F3CQ6NXT2 135 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 C20orf196Q8IYI0 205 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 PNLDC1Q8NA58 520 aaKnown RBP10.61□□□□□ -0.71
HMGCL-202ENST00000374487 OR2AK2Q8NG84 335 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 NUDCD2Q8WVJ2 157 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 SPTSSAQ969W0 71 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 NABP1Q96AH0 204 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 CITED4Q96RK1 184 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 FBLN5Q9UBX5 448 aa10.61□□□□□ -0.71
HMGCL-202ENST00000374487 FOXD3Q9UJU5 478 aaPredicted RBP10.61□□□□□ -0.71
HMGCL-202ENST00000374487 M0R233 179 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 ERVH48-1M5A8F1 160 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 NOS1APO75052 506 aaPredicted RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 SIX6O95475 246 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 OR4E1P0C645 316 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 RFPL3SP0C7P2 107 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 GDF1P27539 372 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 FAM189A2Q15884 450 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 WIPI1Q5MNZ9 446 aaPredicted RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 FOXL2NBQ6ZUU3 175 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 OR2W3Q7Z3T1 314 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 RNF144BQ7Z419 303 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 GVQW1Q8N7I0 195 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 OR14K1Q8NGZ2 314 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 THOC3Q96J01 351 aaKnown RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 SLC6A7Q99884 636 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 PRRT1Q99946 306 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 PLEKHA6Q9Y2H5 1048 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 SPENQ96T58 3664 aaKnown RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 PHF3Q92576 2039 aaKnown RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 WIPF3A6NGB9 483 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 ZNF891A8MT65 544 aaPredicted RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 E9PLN8 166 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 F5H5P2 479 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 K7EM74 188 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 M0R135 149 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 CXCL13O43927 109 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 CRTAPO75718 401 aaPredicted RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 SNAPC5O75971 98 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 SLC22A5O76082 557 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 IFNA7P01567 189 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 POU3F2P20265 443 aaPredicted RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 NFYAP23511 347 aaPredicted RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 STARP49675 285 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 SUCLG1P53597 346 aaKnown RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 H2BFSP57053 126 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 MRPS34P82930 218 aaKnown RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 ECH1Q13011 328 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 GRK1Q15835 563 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 FAM27BQ5VT28 67 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 OR52W1Q6IF63 320 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 TMEM104Q8NE00 496 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 ROBO4Q8WZ75 1007 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 ZNF837Q96EG3 531 aaPredicted RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 ZNF799Q96GE5 643 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 NUDT16L1Q9BRJ7 211 aaKnown RBP10.6□□□□□ -0.71
HMGCL-202ENST00000374487 NICN1Q9BSH3 213 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 TMEM59Q9BXS4 323 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 BANF2Q9H503 90 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 HEXA-AS1Q9H8Q6 139 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 CRLF2Q9HC73 371 aa10.6□□□□□ -0.71
HMGCL-202ENST00000374487 LOC100509620A0A075B734 347 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 A0A0U1RQV5 110 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 C5orf63A6NC05 138 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 LRRC3CA6NJW4 275 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 C21orf140B9A014 251 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 L7N2F9 121 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 CDC14BO60729 498 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 MTRF1O75570 445 aaKnown RBP10.59□□□□□ -0.71
HMGCL-202ENST00000374487 DHRS3O75911 302 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 IFNA6P05013 189 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 ZNF735P0CB33 412 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 ZNF35P13682 527 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 SLC22A6Q4U2R8 563 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 DMRTC1Q5HYR2 192 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 AAED1Q7RTV5 226 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 GGNQ86UU5 652 aa10.59□□□□□ -0.71
HMGCL-202ENST00000374487 FAM109AQ8N4B1 249 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms