RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PLSCR5A0PG75 271 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 OR14I1A6ND48 311 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 F5H5P2 479 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 FCGR2AP12318 317 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 AP2S1P53680 142 aaPredicted RBP14□□□□□ -0.17
CNKSR1-202ENST00000374253 NAXDQ8IW45 347 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 RAB3CQ96E17 227 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 SLCO5A1Q9H2Y9 848 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 GPR173Q9NS66 373 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 IL17BQ9UHF5 180 aa14□□□□□ -0.17
CNKSR1-202ENST00000374253 OR2AT4A6NND4 320 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 L7N2F9 121 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 SGCEO43556 437 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 HLA-AP01891 365 aaKnown RBP13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 ITGA3P26006 1051 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 SORDQ00796 357 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 DHRS2Q13268 280 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 OPCMLQ14982 345 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 CEACAM16Q2WEN9 425 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 BOD1L1Q8NFC6 3051 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 OR2V1Q8NHB1 315 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 PNPLA2Q96AD5 504 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 DHRS3O75911 302 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 ZNF32P17041 273 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 NFYAP23511 347 aaPredicted RBP13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 ACKR3P25106 362 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 CASRP41180 1078 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 FOXO1Q12778 655 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 LRRC37A5PQ49AS3 106 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 H3F3CQ6NXT2 135 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 GPR137CQ8N3F9 429 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 C12orf45Q8N5I9 185 aaPredicted RBP13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 OR51T1Q8NGJ9 327 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 SGK3Q96BR1 496 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 SPRY4Q9C004 299 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 CST11Q9H112 138 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 UPB1Q9UBR1 384 aa13.99□□□□□ -0.17
CNKSR1-202ENST00000374253 CNOT1A5YKK6 2376 aaKnown RBP13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 DISC1C4P0D8 188 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 NEURL1O76050 574 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 FAM27BQ5VT28 67 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 FOXL2NBQ6ZUU3 175 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 ADAD2Q8NCV1 583 aaKnown RBP13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 STEAP2Q8NFT2 490 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 KCNG3Q8TAE7 436 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 CASTOR1Q8WTX7 329 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 SEC22AQ96IW7 307 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 ADGRG7Q96K78 797 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 SLC25A21Q9BQT8 299 aaPredicted RBP13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 NOP16Q9Y3C1 178 aaKnown RBP13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 ZNF883P0CG24 379 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 AKR1C4P17516 323 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 PTGFRP43088 359 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 MRPS34P82930 218 aaKnown RBP13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 ATP1A1-AS1Q5TC04 95 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 KCNE4Q8WWG9 221 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 FN3KRPQ9HA64 309 aa13.98□□□□□ -0.17
CNKSR1-202ENST00000374253 MCRIP1C9JLW8 97 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 ANGPTL7O43827 346 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 LCATP04180 440 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 HIST1H1DP16402 221 aaKnown RBP13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 CTSSP25774 331 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 ZNF133P52736 654 aaPredicted RBP13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 CAPZA1P52907 286 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 HIST1H3AP68431 136 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 PPP1R1AQ13522 171 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 ARFRP1Q13795 201 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 LY6G6FQ5SQ64 297 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 HIST2H3PS2Q5TEC6 136 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 HIST2H3AQ71DI3 136 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 OR4K15Q8NH41 348 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 CCDC107Q8WV48 283 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 SPTSSAQ969W0 71 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 ST6GALNAC5Q9BVH7 336 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 TMEM38BQ9NVV0 291 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 ZNF224Q9NZL3 707 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 FAM25EA8MYX2 175 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 IGLV3-1P01715 115 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 IFNA6P05013 189 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 MELTFP08582 738 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 PI3P19957 117 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 VAMP1P23763 118 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 HTR5AP47898 357 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 SEC61A1P61619 476 aaKnown RBP13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 ECH1Q13011 328 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 C3AR1Q16581 482 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 MICBQ29980 383 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 ABHD17BQ5VST6 288 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 MARCH1Q8TCQ1 289 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 SF3B5Q9BWJ5 86 aaKnown RBP13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 ZNF581Q9P0T4 197 aa13.97□□□□□ -0.17
CNKSR1-202ENST00000374253 DSPP15924 2871 aaKnown RBP13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 FAM230AA0A1W2PPH8 454 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 LEUTXA8MZ59 168 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 MT-CO3P00414 261 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 MGMTP16455 207 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 AVPR2P30518 371 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 OTX1P32242 354 aaPredicted RBP13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 MAGEA5P43359 124 aa13.96□□□□□ -0.17
CNKSR1-202ENST00000374253 OR3A3P47888 321 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms