RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TNFRSF10CO14798 259 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.46
USP49-201ENST00000373006 NSA2O95478 260 aaKnown RBP12.15□□□□□ -0.46
USP49-201ENST00000373006 TNFP01375 233 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 CD5P06127 495 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 PRF1P14222 555 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 SLC6A9P48067 706 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 NDUFA6P56556 154 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 Q6ZRG5 221 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.15□□□□□ -0.46
USP49-201ENST00000373006 RAB3CQ96E17 227 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 SAT2Q96F10 170 aaPredicted RBP12.15□□□□□ -0.46
USP49-201ENST00000373006 AQP10Q96PS8 301 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 CDC6Q99741 560 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 RTBDNQ9BSG5 229 aaPredicted RBP12.15□□□□□ -0.46
USP49-201ENST00000373006 GGACTQ9BVM4 153 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 LPAR5Q9H1C0 372 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 RAB18Q9NP72 206 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 URGCP-MRPS24S4R325 110 aa12.15□□□□□ -0.46
USP49-201ENST00000373006 BPNT1O95861 308 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 HSD11B1P28845 292 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 SLC6A8P48029 635 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
USP49-201ENST00000373006 OR51E1Q8TCB6 317 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 MRGPRX1Q96LB2 322 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 SLC26A1Q9H2B4 701 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 SLC2A4RGQ9NR83 387 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 CACFD1Q9UGQ2 172 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 C2orf16Q68DN1 1984 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 MT-ATP6P00846 226 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 PGCP20142 388 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 OR3A4PP47883 348 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 ARFRP1Q13795 201 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 ZNF248Q8NDW4 579 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 OR5D14Q8NGL3 314 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 GPBAR1Q8TDU6 330 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 OBP2AQ9NY56 170 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 RPS10P46783 165 aaKnown RBP12.14□□□□□ -0.47
USP49-201ENST00000373006 TMEM50BP56557 158 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 SLC26A5P58743 744 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 HGFACQ04756 655 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 LCN10Q6JVE6 187 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 TGM7Q96PF1 710 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 PBOV1Q9GZY1 135 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 SOHLH2Q9NX45 425 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 MMP24Q9Y5R2 645 aa12.14□□□□□ -0.47
USP49-201ENST00000373006 A8MVM7 634 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 SOX15O60248 233 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 CTSEP14091 401 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 ADIPOR1Q96A54 375 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 C2orf50Q96LR7 162 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 SLC46A1Q96NT5 459 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 NUDT22Q9BRQ3 303 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 RNF122Q9H9V4 155 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 FAM206AQ9NX38 181 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 FAM221BA6H8Z2 402 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 TMEM14DPA8MWL7 114 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 AHSA1O95433 338 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 HKR1P10072 659 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 ANOS1P23352 680 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 OR3A2P47893 321 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 POU3F1Q03052 451 aaPredicted RBP12.13□□□□□ -0.47
USP49-201ENST00000373006 NUP54Q7Z3B4 507 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 DPPA2Q7Z7J5 298 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 C15orf54Q8N8G6 183 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 OR5D18Q8NGL1 313 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 OR5H2Q8NGV7 314 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 SLAMF6Q96DU3 332 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 MRPL38Q96DV4 380 aaKnown RBP12.13□□□□□ -0.47
USP49-201ENST00000373006 LURAP1Q96LR2 239 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 ATG101Q9BSB4 218 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 MRPS28Q9Y2Q9 187 aaKnown RBP12.13□□□□□ -0.47
USP49-201ENST00000373006 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
USP49-201ENST00000373006 KIR2DS5A0A0G2JLQ3 304 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 A0A0G2JNG1 304 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 A0A1W2PPE2 198 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 NPIPA5E9PKD4 350 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 KIR2DS3K7RE56 304 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 MFNGO00587 321 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 NPIPB7O75200 414 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 CRTAPO75718 401 aaPredicted RBP12.12□□□□□ -0.47
USP49-201ENST00000373006 AMY2BP19961 511 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 S100A2P29034 98 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 DHPSP49366 369 aaPredicted RBP12.12□□□□□ -0.47
USP49-201ENST00000373006 P2RY4P51582 365 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 POLR2HP52434 150 aaKnown RBP12.12□□□□□ -0.47
USP49-201ENST00000373006 DVL1P1P54792 670 aaPredicted RBP12.12□□□□□ -0.47
USP49-201ENST00000373006 SPEM2Q0P670 501 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 PLCXD2Q0VAA5 305 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 KIR2DS5Q14953 304 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 RNF212Q495C1 297 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 ACTBL2Q562R1 376 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 AWAT1Q58HT5 328 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 GABRG3Q99928 467 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 NPIPA1Q9UND3 350 aa12.12□□□□□ -0.47
USP49-201ENST00000373006 FAM157AC9JC47 383 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms