RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PCYT2Q99447 389 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 Q9N2K0 584 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 LANCL2Q9NS86 450 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 NCOR1O75376 2440 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 DDX60Q8IY21 1712 aaKnown RBP13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 SIX1Q15475 284 aaPredicted RBP13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 GLDNQ6ZMI3 551 aaPredicted RBP13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 FAM221AA4D161 298 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 AOAHP28039 575 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 PRTGQ2VWP7 1150 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 LOC107986453A0A1B0GWG9 222 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 IFITM10A6NMD0 228 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 MFNGO00587 321 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 MELTFP08582 738 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 STAG3L3P0CL85 134 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 EN2P19622 333 aaPredicted RBP13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 PRRX1P54821 245 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 RPS16P62249 146 aaKnown RBP13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 FABP5Q01469 135 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 CLEC4DQ8WXI8 215 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 SELEP16581 610 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 IHHQ14623 411 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 LIPGQ9Y5X9 500 aa13.92□□□□□ -0.18
GTF3C4-201ENST00000372146 GPX5O75715 221 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 CD96P40200 585 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 FAM209AQ5JX71 171 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 MUC15Q8N387 334 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 D2HGDHQ8N465 521 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 KLK11Q9UBX7 282 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 LNP1A1A4G5 178 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 SSBP1Q04837 148 aaKnown RBP13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 GAB4Q2WGN9 574 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 SLC25A22Q9H936 323 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 RBFOX3A6NFN3 312 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 ZNF716A6NP11 495 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 PPP6CO00743 305 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 ZNF217O75362 1048 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 SDHBP21912 280 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 NGBQ9NPG2 151 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 TRAV36DV7A0A075B6V5 113 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 HPP00738 406 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 CD82P27701 267 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 OR5C1Q8NGR4 320 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 TMEM128Q5BJH2 165 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 OTUD1Q5VV17 481 aaPredicted RBP13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 CALHM1Q8IU99 346 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 NUDT10Q8NFP7 164 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 NXPE3Q969Y0 559 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 SMIM19Q96E16 107 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 NUDT11Q96G61 164 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 CORTO00230 105 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 SIRPB1O00241 398 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 GOSR1O95249 250 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 CST4P01036 141 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 DAOP14920 347 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 CLDN2P57739 230 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 DLK1P80370 383 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 FOXO1Q12778 655 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 DOK3Q7L591 496 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 ISL2Q96A47 359 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 OPALINQ96PE5 141 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 SPACA5Q96QH8 159 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 C1QTNF3Q9BXJ4 246 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 ZNF98A6NK75 572 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 TBC1D26Q86UD7 250 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 ZNF687Q8N1G0 1237 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 SLC17A9Q9BYT1 436 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 MANBALQ9NQG1 85 aa13.91□□□□□ -0.18
GTF3C4-201ENST00000372146 MRC1P22897 1456 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 APCSP02743 223 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 RANBP10Q6VN20 620 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 ARFGEF3Q5TH69 2177 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 TMEM210A6NLX4 147 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 MISPQ8IVT2 679 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 SLC46A1Q96NT5 459 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 IL5P05113 134 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 CST6Q15828 149 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 RHBDD2Q6NTF9 364 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 C12orf49Q9H741 205 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 ZFP30Q9Y2G7 519 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 CAMTA1Q9Y6Y1 1673 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 ARSAP15289 507 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 RING1Q06587 406 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 VASH2Q86V25 355 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 OR13G1Q8NGZ3 307 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 DOK5Q9P104 306 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 DOCK5Q9H7D0 1870 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 MAP1LC3B2A6NCE7 125 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 IFITM5A6NNB3 132 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 ARF6P62330 175 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 ZNF385CQ66K41 422 aaPredicted RBP13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 MYOZ3Q8TDC0 251 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 EID2BQ96D98 161 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 MAP1LC3BQ9GZQ8 125 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 FAM110CQ1W6H9 321 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 CADP27708 2225 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 DHRS7CA6NNS2 312 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 PIPP12273 146 aaPredicted RBP13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 LINC00303Q3SY05 128 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms