RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 R4GMQ9 66 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 ESPL1Q14674 2120 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 PHF3Q92576 2039 aaKnown RBP7.63□□□□□ -1.19
TPM3-213ENST00000368545 ZNF503-AS2A6NEH8 195 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 OR4C45A6NMZ5 311 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 OR2C1O95371 312 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 CDAP32320 146 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 Q499Y3 187 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 WDR38Q5JTN6 314 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 C16orf87Q6PH81 154 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 OR8H3Q8N146 312 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 GPR148Q8TDV2 347 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 WDYHV1Q96HA8 205 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 OR14A2Q96R54 314 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 ABHD1Q96SE0 405 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 LINC00470Q9BZP3 86 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 NOSIPQ9Y314 301 aaKnown RBP7.63□□□□□ -1.19
TPM3-213ENST00000368545 ZNF175Q9Y473 711 aa7.63□□□□□ -1.19
TPM3-213ENST00000368545 CELSR3Q9NYQ7 3312 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 CACNA1CQ13936 2221 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 SHANK1Q9Y566 2161 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 MRPL33O75394 65 aaKnown RBP7.62□□□□□ -1.19
TPM3-213ENST00000368545 RAF1P04049 648 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 ETV6P41212 452 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 GRB2P62993 217 aaKnown RBP7.62□□□□□ -1.19
TPM3-213ENST00000368545 PMP22Q01453 160 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 ZNF45Q02386 682 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 HSD17B12Q53GQ0 312 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 PHYHD1Q5SRE7 291 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 OTPQ5XKR4 325 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 CATSPERDQ86XM0 798 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 GJC3Q8NFK1 279 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 OR13C5Q8NGS8 318 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 FNDC9Q8TBE3 224 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 ACOT12Q8WYK0 555 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 CEP19Q96LK0 163 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 DERL3Q96Q80 235 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 KCNS3Q9BQ31 491 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 RBM24Q9BX46 236 aaKnown RBP7.62□□□□□ -1.19
TPM3-213ENST00000368545 SLCO5A1Q9H2Y9 848 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 MRPL15Q9P015 296 aaKnown RBP7.62□□□□□ -1.19
TPM3-213ENST00000368545 SPRR3Q9UBC9 169 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 B3GNT3Q9Y2A9 372 aa7.62□□□□□ -1.19
TPM3-213ENST00000368545 LOC400499M0QZD8 3231 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 TRBV5-5A0A0J9YX44 114 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 LOC110117498-PIK3R3F6TDL0 507 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 PDCD5O14737 125 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 RGS5O15539 181 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 SRSF10O75494 262 aaKnown RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 OCM2P0CE71 109 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 UBCP0CG48 685 aaKnown RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 RAB3BP20337 219 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 HSD11B1P28845 292 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 CD40LGP29965 261 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 KIR3DL2P43630 455 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 DYRK1AQ13627 763 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 SGCAQ16586 387 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 SPANXN2Q5MJ10 180 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 FAM27D1Q5T7N8 215 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 DDI2Q5TDH0 399 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 FAM27BQ5VT28 67 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 CORO6Q6QEF8 472 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 ZNF704Q6ZNC4 412 aaPredicted RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 CFAP77Q6ZQR2 320 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 Q6ZS92 163 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 PRSS35Q8N3Z0 413 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 ZBTB8BQ8NAP8 495 aaPredicted RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 TMEM116Q8NCL8 245 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 RGP1Q92546 391 aaPredicted RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 NABP1Q96AH0 204 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 SARAFQ96BY9 339 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 SNRNP40Q96DI7 357 aaKnown RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 WACQ9BTA9 647 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 ZNF416Q9BWM5 594 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 SLITRK2Q9H156 845 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 SCPEP1Q9HB40 452 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 CENPMQ9NSP4 180 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 OSGIN2Q9Y236 505 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 CMAHPQ9Y471 501 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 TMEM269A0A1B0GVZ9 245 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 ANKRD61A6NGH8 418 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 KRT33AO76009 404 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 ISG15P05161 165 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 YES1P07947 543 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 CST2P09228 141 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 PPP3R1P63098 170 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 MFGE8Q08431 387 aaPredicted RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 ENDOGQ14249 297 aaKnown RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 BCL2L15Q5TBC7 163 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 OR10S1Q8NGN2 331 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 ALKBH3Q96Q83 286 aaPredicted RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 ATF6BQ99941 703 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 PPIL3Q9H2H8 161 aaKnown RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 CRLF2Q9HC73 371 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 NOX4Q9NPH5 578 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 GLRX2Q9NS18 164 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 DDX28Q9NUL7 540 aaKnown RBP7.61□□□□□ -1.19
TPM3-213ENST00000368545 TMEM38BQ9NVV0 291 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 OR52A1Q9UKL2 312 aa7.61□□□□□ -1.19
TPM3-213ENST00000368545 ARHGAP21Q5T5U3 1957 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms