RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 TO15178 435 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 NPIPB7O75200 414 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 KLF7O75840 302 aaPredicted RBP10.2□□□□□ -0.78
USF1-201ENST00000368019 UTS2O95399 124 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 PNPP00491 289 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 PLATP00750 562 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 CHRM2P08172 466 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 PGCP20142 388 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 PVALBP20472 110 aaPredicted RBP10.2□□□□□ -0.78
USF1-201ENST00000368019 PSMB6P28072 239 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 RAB13P51153 203 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 GPR85P60893 370 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 IL13RA1P78552 427 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 PJVKQ0ZLH3 352 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 ZP4Q12836 540 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 TAF13Q15543 124 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 VAX1Q5SQQ9 334 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 GLYATL3Q5SZD4 288 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 EIF5AL1Q6IS14 154 aaKnown RBP10.2□□□□□ -0.78
USF1-201ENST00000368019 LDLRAD3Q86YD5 345 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 BAP18Q8IXM2 172 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 PUSL1Q8N0Z8 303 aaKnown RBP10.2□□□□□ -0.78
USF1-201ENST00000368019 GTPBP8Q8N3Z3 284 aaPredicted RBP10.2□□□□□ -0.78
USF1-201ENST00000368019 ARRDC1Q8N5I2 433 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 OR8K3Q8NH51 312 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 ZNF563Q8TA94 476 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 ELP5Q8TE02 316 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 TAAR8Q969N4 342 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 KTI12Q96EK9 354 aaPredicted RBP10.2□□□□□ -0.78
USF1-201ENST00000368019 ABHD6Q9BV23 337 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 RAB18Q9NP72 206 aa10.2□□□□□ -0.78
USF1-201ENST00000368019 SVILO95425 2214 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 MEIS3P1A6NDR6 274 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 ALG1L2C9J202 215 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 M0QYG6 137 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 HRKO00198 91 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 TAAR5O14804 337 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 NUPL2O15504 423 aaKnown RBP10.19□□□□□ -0.78
USF1-201ENST00000368019 ZNF208O43345 1280 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 OIP5O43482 229 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 OR2T1O43869 369 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 DDAH2O95865 285 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 APOC1P02654 83 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 GSTP1P09211 210 aaKnown RBP10.19□□□□□ -0.78
USF1-201ENST00000368019 PET100P0DJ07 73 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 ABOP16442 354 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 CXCR1P25024 350 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 GABRA4P48169 554 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 ATP1B3P54709 279 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 RRADP55042 308 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 GLO1Q04760 184 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 MRPL49Q13405 166 aaKnown RBP10.19□□□□□ -0.78
USF1-201ENST00000368019 PPP1R1AQ13522 171 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 NKPD1Q17RQ9 610 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 EIF2S3LQ2VIR3 472 aaKnown RBP10.19□□□□□ -0.78
USF1-201ENST00000368019 FAM74A1Q5RGS3 127 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 HOGA1Q86XE5 327 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 OR13C3Q8NGS6 347 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 TCTN2Q96GX1 697 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 ZNF75AQ96N20 296 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 AQP10Q96PS8 301 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 PTDSS2Q9BVG9 487 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 RNF122Q9H9V4 155 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 CHMP1AQ9HD42 196 aaPredicted RBP10.19□□□□□ -0.78
USF1-201ENST00000368019 ZFP57Q9NU63 452 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 LUZP4Q9P127 313 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 ZNF230Q9UIE0 474 aaPredicted RBP10.19□□□□□ -0.78
USF1-201ENST00000368019 FBXO9Q9UK97 447 aaPredicted RBP10.19□□□□□ -0.78
USF1-201ENST00000368019 SLC22A13Q9Y226 551 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 SLC5A6Q9Y289 635 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 LRP12Q9Y561 859 aa10.19□□□□□ -0.78
USF1-201ENST00000368019 ABCA12Q86UK0 2595 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 A0A0A6YYC8 382 aaPredicted RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 LOC107986453A0A1B0GWG9 222 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 H7C1C5 153 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 I3L1I5 382 aaPredicted RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 HCRTR1O43613 425 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 PLGP00747 810 aaPredicted RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 FCER2P06734 321 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 ERCC1P07992 297 aaPredicted RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 SPARCP09486 303 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 MAOAP21397 527 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 MMP16P51512 607 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 CCR4P51679 360 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 POLR2HP52434 150 aaKnown RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 SLC37A1P57057 533 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 LCN6P62502 163 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 QRFPP83859 136 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 MFGE8Q08431 387 aaPredicted RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 EIF2B1Q14232 305 aaKnown RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 HMGN3Q15651 99 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 ACKR1Q16570 336 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 PLEKHN1Q494U1 663 aaPredicted RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 ZNF529Q6P280 563 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 PRSS54Q6PEW0 395 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 FJX1Q86VR8 437 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 SLC22A24Q8N4F4 322 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 PAQR4Q8N4S7 273 aaPredicted RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 PLPP7Q8NBV4 271 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 SNRNP40Q96DI7 357 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms