RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 DAP3P51398 398 aaKnown RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 ARHGDIAP52565 204 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 ZNF133P52736 654 aaPredicted RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 MRPS34P82930 218 aaKnown RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 PGGHGQ32M88 737 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 CLEC12AQ5QGZ9 265 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 CARD17Q5XLA6 110 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 ACSM5Q6NUN0 579 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 RPL13AP3Q6NVV1 102 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 CBR4Q8N4T8 237 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 IQCF1Q8N6M8 205 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 WFDC11Q8NEX6 87 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 NOXO1Q8NFA2 376 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 KBTBD8Q8NFY9 601 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 OR1K1Q8NGR3 316 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 SMAP2Q8WU79 429 aaPredicted RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 BCL2L2Q92843 193 aaPredicted RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 SAT2Q96F10 170 aaPredicted RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 SLC25A44Q96H78 314 aaPredicted RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 CENPOQ9BU64 300 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 TSSK6Q9BXA6 273 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 DCLRE1BQ9H816 532 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 RNPEPL1Q9HAU8 725 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 STX18Q9P2W9 335 aaKnown RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 CRNNQ9UBG3 495 aaPredicted RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 POFUT2Q9Y2G5 429 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 IER3IP1Q9Y5U9 82 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 SONP18583 2426 aaKnown RBP6.65□□□□□ -1.35
YBX3-204ENST00000366290 FBN1P35555 2871 aaKnown RBP6.64□□□□□ -1.35
YBX3-204ENST00000366290 PRSS37A4D1T9 235 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 ZNF726A6NNF4 738 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 CENPBD1B2RD01 187 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 H7C1C5 153 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 M0R3G1 203 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 ABCD4O14678 606 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 NDUFS7O75251 213 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 SLC2A10O95528 541 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 IGLV1-44P01699 117 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 IGHG1P01857 330 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 SOD3P08294 240 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 HIST1H1CP16403 213 aaKnown RBP6.64□□□□□ -1.35
YBX3-204ENST00000366290 ACVR1BP36896 505 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 SLC15A1P46059 708 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 CSNK1A1P48729 337 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 ALDH3A2P51648 485 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 CRISP1P54107 249 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 MFAP4P55083 255 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 LCN6P62502 163 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 CDK5Q00535 292 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 MYBPC1Q00872 1141 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 FMODQ06828 376 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 KRR1Q13601 381 aaKnown RBP6.64□□□□□ -1.35
YBX3-204ENST00000366290 TMEM236Q5W0B7 351 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 LPCAT4Q643R3 524 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 GPR139Q6DWJ6 353 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 SLC25A47Q6Q0C1 308 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 FOXRED2Q8IWF2 684 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 CCDC36Q8IYA8 594 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 SYT14Q8NB59 555 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 NPEPL1Q8NDH3 523 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 OR52L1Q8NGH7 329 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 OR52N5Q8NH56 324 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 DNAJC9Q8WXX5 260 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 MCHR2Q969V1 340 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 ERMAPQ96PL5 475 aaPredicted RBP6.64□□□□□ -1.35
YBX3-204ENST00000366290 RBM4BQ9BQ04 359 aaKnown RBP6.64□□□□□ -1.35
YBX3-204ENST00000366290 SLC25A33Q9BSK2 321 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 ALG12Q9BV10 488 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 RBM4Q9BWF3 364 aaKnown RBP6.64□□□□□ -1.35
YBX3-204ENST00000366290 GABARAPL3Q9BY60 117 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 SLC25A19Q9HC21 320 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 FAIMQ9NVQ4 179 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 GLTPQ9NZD2 209 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 RRP15Q9Y3B9 282 aaKnown RBP6.64□□□□□ -1.35
YBX3-204ENST00000366290 CMAHPQ9Y471 501 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 UGT2A1Q9Y4X1 527 aa6.64□□□□□ -1.35
YBX3-204ENST00000366290 ANK3Q12955 4377 aaKnown RBP6.63□□□□□ -1.35
YBX3-204ENST00000366290 A0A1W2PR80 420 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 A6NIZ1 184 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 ZNF99A8MXY4 864 aaPredicted RBP6.63□□□□□ -1.35
YBX3-204ENST00000366290 H3BN98 237 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 DCTN6O00399 190 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 IDH3BO43837 385 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 KRT33AO76009 404 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 IGKV3-15P01624 115 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 CD8AP01732 235 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 QDPRP09417 244 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 CTLA4P16410 223 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 ANXA7P20073 488 aaKnown RBP6.63□□□□□ -1.35
YBX3-204ENST00000366290 IGFBP5P24593 272 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 CDH11P55287 796 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 RAP1BP61224 184 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 ESRRGP62508 458 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 RAP1AP62834 184 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 RIPK1Q13546 671 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 GINS1Q14691 196 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 PTGES3Q15185 160 aaKnown RBP6.63□□□□□ -1.35
YBX3-204ENST00000366290 TRIP10Q15642 601 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 PNLIPRP3Q17RR3 467 aa6.63□□□□□ -1.35
YBX3-204ENST00000366290 CEACAM16Q2WEN9 425 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms