RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 USF3Q68DE3 2245 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 CCDC168Q8NDH2 2452 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 LOC107986453A0A1B0GWG9 222 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 E9PI62 339 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 IFNL4K9M1U5 179 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 ZFPL1O95159 310 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 CSF3P09919 207 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 GNALP38405 381 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 SRP9P49458 86 aaKnown RBP11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 CDH15P55291 814 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 DSCR9P59020 149 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 SHEQ5VZ18 495 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 TMEM42Q69YG0 159 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 DMKNQ6E0U4 476 aaPredicted RBP11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 OR2Z1Q8NG97 314 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 SGCDQ92629 289 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 THRSPQ92748 146 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 ELMOD3Q96FG2 381 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 FAM71F1Q96KD3 344 aaPredicted RBP11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 TECTBQ96PL2 329 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 PIGLQ9Y2B2 252 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 ZNF281Q9Y2X9 895 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 CSMD1Q96PZ7 3565 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 ARID1AO14497 2285 aa11.76□□□□□ -0.53
NSMCE1-201ENST00000361439 ANXA2P2A6NMY6 339 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 SPRY3O43610 288 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 PTBP3O95758 552 aaKnown RBP11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 SERPINA3P01011 423 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 IGHV4-39P01824 125 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 CA6P23280 308 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 CD200P41217 278 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 GATA4P43694 442 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 GTF2A1P52655 376 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 TNFAIP6P98066 277 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 OR8G1Q15617 311 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 YIF1BQ5BJH7 314 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 CLVS2Q5SYC1 327 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 ZNF773Q6PK81 442 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 ZNF367Q7RTV3 350 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 GPR148Q8TDV2 347 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 PP6455Q8WZ26 134 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 FCGR1BQ92637 280 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 RDH5Q92781 318 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 HIST1H2AAQ96QV6 131 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 NR1H4Q96RI1 486 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 PAPOLGQ9BWT3 736 aaKnown RBP11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 PLEKHA1Q9HB21 404 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 ACOT13Q9NPJ3 140 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 DLL4Q9NR61 685 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 ZNF275Q9NSD4 429 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 C14orf119Q9NWQ9 140 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 RHBDD3Q9Y3P4 386 aa11.75□□□□□ -0.53
NSMCE1-201ENST00000361439 NDUFS8O00217 210 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 MLNRO43193 412 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 LILRA1O75019 489 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 LALBAP00709 142 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 CELP19835 753 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 CRYBB2P43320 205 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 MAGEB1P43366 347 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 CCL8P80075 99 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 EMX1Q04741 257 aaPredicted RBP11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 MLLT11Q13015 90 aaPredicted RBP11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 MED22Q15528 200 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 ODF4Q2M2E3 257 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 CEACAM21Q3KPI0 293 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 XAF1Q6GPH4 301 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 UTS2BQ765I0 119 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 ZDHHC23Q8IYP9 409 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 RDH10Q8IZV5 341 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 SPARTQ8N0X7 666 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 MS4A15Q8N5U1 240 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 UBASH3BQ8TF42 649 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 GHSRQ92847 366 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 ITPKCQ96DU7 683 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 PERPQ96FX8 193 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 PGLYRP3Q96LB9 341 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 OR5M11Q96RB7 305 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 PDCD1LG2Q9BQ51 273 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 SOX7Q9BT81 388 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 ADAT1Q9BUB4 502 aaKnown RBP11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 TPK1Q9H3S4 243 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 ZNF696Q9H7X3 374 aa11.74□□□□□ -0.53
NSMCE1-201ENST00000361439 TMEM210A6NLX4 147 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 GATBO75879 557 aaKnown RBP11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 ALX3O95076 343 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 NRASP01111 189 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 CD2P06729 351 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 DAOP14920 347 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 FAHP16930 419 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 PCMT1P22061 227 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 PSMA1P25786 263 aaKnown RBP11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 PRSS12P56730 875 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 SLC3A1Q07837 685 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 TPBGQ13641 420 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 TRAM1Q15629 374 aa11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 TSTQ16762 297 aaKnown RBP11.73□□□□□ -0.53
NSMCE1-201ENST00000361439 ZNF181Q2M3W8 571 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms