RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 RRAS2P62070 204 aaPredicted RBP12.32□□□□□ -0.44
CTR9-201ENST00000361367 HES1Q14469 280 aa12.32□□□□□ -0.44
CTR9-201ENST00000361367 IAH1Q2TAA2 248 aaPredicted RBP12.32□□□□□ -0.44
CTR9-201ENST00000361367 LGI3Q8N145 548 aa12.32□□□□□ -0.44
CTR9-201ENST00000361367 ARHGEF39Q8N4T4 335 aa12.32□□□□□ -0.44
CTR9-201ENST00000361367 SLC23A1Q9UHI7 598 aa12.32□□□□□ -0.44
CTR9-201ENST00000361367 WDR1O75083 606 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 COX6A1P12074 109 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 HLA-DOBP13765 273 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 CLDN20P56880 219 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 INSL4Q14641 139 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 KISS1Q15726 138 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 FOXB2Q5VYV0 432 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 ELP2Q6IA86 826 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 CXorf67Q86X51 503 aaPredicted RBP12.31□□□□□ -0.44
CTR9-201ENST00000361367 OR4A16Q8NH70 328 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 SEC22CQ9BRL7 303 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 ZNF2Q9BSG1 426 aaPredicted RBP12.31□□□□□ -0.44
CTR9-201ENST00000361367 RANGRFQ9HD47 186 aaPredicted RBP12.31□□□□□ -0.44
CTR9-201ENST00000361367 MRM2Q9UI43 246 aaKnown RBP12.31□□□□□ -0.44
CTR9-201ENST00000361367 FBXO7Q9Y3I1 522 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 H3BMH7 237 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 GLI4P10075 376 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 DUSP1P28562 367 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 BEX5Q5H9J7 111 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 SFRP5Q5T4F7 317 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 NUFIP2Q7Z417 695 aaKnown RBP12.31□□□□□ -0.44
CTR9-201ENST00000361367 FAM185AQ8N0U4 392 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTR9-201ENST00000361367 FOXJ2Q9P0K8 574 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 FZR1Q9UM11 496 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 IGLV3-21P80748 117 aaPredicted RBP12.31□□□□□ -0.44
CTR9-201ENST00000361367 PCOLCEQ15113 449 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 SSX1Q16384 188 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 PRSS27Q9BQR3 290 aa12.31□□□□□ -0.44
CTR9-201ENST00000361367 ANK1P16157 1881 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 K7EPK0 472 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 TSPAN4O14817 238 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 GDF9O60383 454 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 GCM2O75603 506 aaPredicted RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 TSPAN15O95858 294 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 TPT1P13693 172 aaKnown RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 MAGEB1P43366 347 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 PMP22Q01453 160 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 FCN2Q15485 313 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 OR6K3Q8NGY3 331 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 TCTEX1D2Q8WW35 142 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 SLAMF9Q96A28 289 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZC3H10Q96K80 434 aaKnown RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 SULT4A1Q9BR01 284 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 PBDC1Q9BVG4 233 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 RIMS4Q9H426 269 aaPredicted RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 LRP5LA4QPB2 252 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF705EA8MWA4 302 aaPredicted RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 FADS1O60427 444 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 GALP22466 123 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 MPGP29372 298 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 FXNQ16595 210 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 MGAMO43451 1857 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ABCD4O14678 606 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 MSTNO14793 375 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 OMGP23515 440 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ATP1A1-AS1Q5TC04 95 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF767PQ75MW2 155 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 OR6S1Q8NH40 331 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 PRR7Q8TB68 274 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 PAQR8Q8TEZ7 354 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 MSI2Q96DH6 328 aaKnown RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF285Q96NJ3 590 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF385AQ96PM9 386 aaKnown RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF275Q9NSD4 429 aaPredicted RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 COPS3Q9UNS2 423 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 OR5H8P0DN80 308 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 SFTPCP11686 197 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 CRYBB2P43320 205 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 PPP1CBP62140 327 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF85Q03923 595 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ZNF92Q03936 586 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ASAH1Q13510 395 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 FHL5Q5TD97 284 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 CREB3L2Q70SY1 520 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 FN3KRPQ9HA64 309 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 KCNJ16Q9NPI9 418 aa12.3□□□□□ -0.44
CTR9-201ENST00000361367 ARHGEF17Q96PE2 2063 aaPredicted RBP12.3□□□□□ -0.44
CTR9-201ENST00000361367 SSTR2P30874 369 aa12.29□□□□□ -0.44
CTR9-201ENST00000361367 PRDX4Q13162 271 aa12.29□□□□□ -0.44
CTR9-201ENST00000361367 GK2Q14410 553 aaPredicted RBP12.29□□□□□ -0.44
CTR9-201ENST00000361367 ESCO2Q56NI9 601 aa12.29□□□□□ -0.44
CTR9-201ENST00000361367 SDSLQ96GA7 329 aa12.29□□□□□ -0.44
CTR9-201ENST00000361367 ESRP2Q9H6T0 727 aaKnown RBP12.29□□□□□ -0.44
CTR9-201ENST00000361367 GPR35Q9HC97 309 aa12.29□□□□□ -0.44
CTR9-201ENST00000361367 TNFSF12O43508 249 aa12.29□□□□□ -0.44
CTR9-201ENST00000361367 CLDN1O95832 211 aa12.29□□□□□ -0.44
CTR9-201ENST00000361367 CD3DP04234 171 aa12.29□□□□□ -0.44
CTR9-201ENST00000361367 ANXA7P20073 488 aaKnown RBP12.29□□□□□ -0.44
CTR9-201ENST00000361367 C6orf183Q5T699 404 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms