RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CAMKMTQ7Z624 323 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 TSEN54Q7Z6J9 526 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 CALHM3Q86XJ0 350 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 SPNS2Q8IVW8 549 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 OR5C1Q8NGR4 320 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 TTC9Q92623 222 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 C1QTNF6Q9BXI9 259 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 ESRP2Q9H6T0 727 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 ST3GAL6Q9Y274 331 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 A0A1W2PPE2 198 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 PPOXP50336 477 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 GNB1P62873 340 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 NUBPLQ8TB37 319 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 A0A1B0GTL3 188 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 H3BNC9 293 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 ZNF737O75373 536 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 ERHP84090 104 aaKnown RBP12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 FFAR4Q5NUL3 377 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 LYRM7Q5U5X0 104 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 B3GNTL1Q67FW5 361 aaPredicted RBP12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 TAAR6Q96RI8 345 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC17A5Q9NRA2 495 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 C7orf77A4D0Y5 90 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 HTRA3P83110 453 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 CDKN3Q16667 212 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC26A10Q8NG04 563 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 PCED1AQ9H1Q7 454 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 IL21Q9HBE4 155 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 RBFOX3A6NFN3 312 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 CD46P15529 392 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 ZNF552Q9H707 407 aaPredicted RBP12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 TARM1B6A8C7 271 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 PNRC1Q12796 327 aaPredicted RBP12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 OR8G1Q15617 311 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 ELAVL1Q15717 326 aaKnown RBP12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 RTL8BQ17RB0 113 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 RPEL1Q2QD12 228 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 BTNL3Q6UXE8 466 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 LRP11Q86VZ4 500 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC39A11Q8N1S5 342 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 TIMM10BQ9Y5J6 103 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 SNCGO76070 127 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 ICAM2P13598 275 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 CRISP2P16562 243 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 OR10J1P30954 320 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 SPCS3P61009 180 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 INPP5JQ15735 1006 aaPredicted RBP12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 LYSMD4Q5XG99 296 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 DPPA3Q6W0C5 159 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 ZNF573Q86YE8 665 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 OR2T10Q8NGZ9 312 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 OR10C1Q96KK4 312 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 COMMD5Q9GZQ3 224 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 TMED3Q9Y3Q3 217 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 PHLPP1O60346 1717 aa12.1□□□□□ -0.47
CCDC144A-203ENST00000360495 CDRT15L2A8MXV6 281 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 SOX15O60248 233 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 CXCL3P19876 107 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 CD81P60033 236 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 ELOBQ15370 118 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 TXNIPQ9H3M7 391 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 FIGNL2A6NMB9 653 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 GPANK1O95872 356 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 KLKB1P03952 638 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 SULT1A1P50225 295 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 DCDP81605 110 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 HSF5Q4G112 596 aaPredicted RBP12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 LYPD8Q6UX82 237 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 TRILQ7L0X0 811 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 OSR2Q8N2R0 312 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 GPR37O15354 613 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 PLPP2O43688 288 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 FGF17O60258 216 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 GLRA1P23415 457 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 WDR73Q6P4I2 378 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 MON2Q7Z3U7 1717 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 ASPDHA6ND91 283 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 LAMTOR5O43504 91 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 ETHE1O95571 254 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 DUS4LO95620 317 aaKnown RBP12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 NDUFB7P17568 137 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 YPEL5P62699 121 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 MED29Q9NX70 200 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 RASL12Q9NYN1 266 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 TIMM9Q9Y5J7 89 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 TMEM272A0A1B0GTI8 110 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 K7ERU9 68 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 GLB1P16278 677 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 TNFRSF4P43489 277 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC25A26Q70HW3 274 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 ABHD1Q96SE0 405 aa12.09□□□□□ -0.47
CCDC144A-203ENST00000360495 LAT2Q9GZY6 243 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms