RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SP1P08047 785 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 IVDP26440 423 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 ZNF534Q76KX8 674 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 OLIG1Q8TAK6 271 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 OIT3Q8WWZ8 545 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 SLC12A9Q9BXP2 914 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 TRBV4-1A0A0J9YWV2 114 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 GFYI3L273 518 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 TGOLN2O43493 480 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 MPDU1O75352 247 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 ADPRHP54922 357 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 DHODHQ02127 395 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 C1QTNF12Q5T7M4 302 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 SLC51BQ86UW2 128 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 ZNF511Q8NB15 262 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 ZNF502Q8TBZ5 544 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 TMEM106AQ96A25 262 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 SLA2Q9H6Q3 261 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 SEBOXQ9HB31 216 aaPredicted RBP8.84□□□□□ -0.99
CHD3-202ENST00000358181 CSAG2Q9Y5P2 127 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 TLCD2A6NGC4 264 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 SHISA8B8ZZ34 492 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 CYC1P08574 325 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 OPRD1P41143 372 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 RELAQ04206 551 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 HMGN3Q15651 99 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 YOD1Q5VVQ6 348 aaPredicted RBP8.84□□□□□ -0.99
CHD3-202ENST00000358181 H1FNTQ75WM6 255 aaPredicted RBP8.84□□□□□ -0.99
CHD3-202ENST00000358181 SLC38A6Q8IZM9 456 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 KLK4Q9Y5K2 254 aa8.84□□□□□ -0.99
CHD3-202ENST00000358181 MN1Q10571 1320 aaPredicted RBP8.84□□□□□ -1
CHD3-202ENST00000358181 M0QZQ0 153 aa8.83□□□□□ -1
CHD3-202ENST00000358181 PI3P19957 117 aa8.83□□□□□ -1
CHD3-202ENST00000358181 TPBGQ13641 420 aa8.83□□□□□ -1
CHD3-202ENST00000358181 TBL2Q9Y4P3 447 aaKnown RBP8.83□□□□□ -1
CHD3-202ENST00000358181 A0A1W2PPQ1 181 aa8.83□□□□□ -1
CHD3-202ENST00000358181 FITM1A5D6W6 292 aa8.83□□□□□ -1
CHD3-202ENST00000358181 HKR1P10072 659 aa8.83□□□□□ -1
CHD3-202ENST00000358181 HOXC8P31273 242 aa8.83□□□□□ -1
CHD3-202ENST00000358181 NKAIN1Q4KMZ8 207 aa8.83□□□□□ -1
CHD3-202ENST00000358181 DOLPP1Q86YN1 238 aa8.83□□□□□ -1
CHD3-202ENST00000358181 OR6K3Q8NGY3 331 aa8.83□□□□□ -1
CHD3-202ENST00000358181 TMEM56Q96MV1 263 aa8.83□□□□□ -1
CHD3-202ENST00000358181 TRAPPC1Q9Y5R8 145 aa8.83□□□□□ -1
CHD3-202ENST00000358181 CLEC18AA5D8T8 446 aa8.83□□□□□ -1
CHD3-202ENST00000358181 PRR32B1ATL7 298 aa8.83□□□□□ -1
CHD3-202ENST00000358181 ACP1P24666 158 aa8.83□□□□□ -1
CHD3-202ENST00000358181 CEACAM6P40199 344 aa8.83□□□□□ -1
CHD3-202ENST00000358181 CD276Q5ZPR3 534 aa8.83□□□□□ -1
CHD3-202ENST00000358181 CLEC18CQ8NCF0 446 aa8.83□□□□□ -1
CHD3-202ENST00000358181 OR8A1Q8NGG7 326 aa8.83□□□□□ -1
CHD3-202ENST00000358181 TSLPQ969D9 159 aa8.83□□□□□ -1
CHD3-202ENST00000358181 SFRP2Q96HF1 295 aa8.83□□□□□ -1
CHD3-202ENST00000358181 CCL27Q9Y4X3 112 aa8.83□□□□□ -1
CHD3-202ENST00000358181 GSTZ1O43708 216 aaPredicted RBP8.83□□□□□ -1
CHD3-202ENST00000358181 PRAF2O60831 178 aa8.83□□□□□ -1
CHD3-202ENST00000358181 DHRS3O75911 302 aa8.83□□□□□ -1
CHD3-202ENST00000358181 CDK2AP2O75956 126 aa8.83□□□□□ -1
CHD3-202ENST00000358181 SBK3P0C264 359 aa8.83□□□□□ -1
CHD3-202ENST00000358181 OPRL1P41146 370 aa8.83□□□□□ -1
CHD3-202ENST00000358181 TPMTP51580 245 aa8.83□□□□□ -1
CHD3-202ENST00000358181 ZNF620Q6ZNG0 422 aa8.83□□□□□ -1
CHD3-202ENST00000358181 BCDIN3DQ7Z5W3 292 aaKnown RBP8.83□□□□□ -1
CHD3-202ENST00000358181 GDPD1Q8N9F7 314 aa8.83□□□□□ -1
CHD3-202ENST00000358181 LAMP3Q9UQV4 416 aa8.83□□□□□ -1
CHD3-202ENST00000358181 OOEPA6NGQ2 149 aa8.83□□□□□ -1
CHD3-202ENST00000358181 UMAD1C9J7I0 102 aa8.83□□□□□ -1
CHD3-202ENST00000358181 ST8SIA5O15466 376 aa8.83□□□□□ -1
CHD3-202ENST00000358181 ZNF137PP52743 207 aa8.83□□□□□ -1
CHD3-202ENST00000358181 RPS25P62851 125 aaKnown RBP8.83□□□□□ -1
CHD3-202ENST00000358181 KHSRPQ92945 711 aaKnown RBP eCLIP8.83□□□□□ -1
CHD3-202ENST00000358181 RALYQ9UKM9 306 aaKnown RBP8.83□□□□□ -1
CHD3-202ENST00000358181 GPR55Q9Y2T6 319 aaPredicted RBP8.83□□□□□ -1
CHD3-202ENST00000358181 H3BMH7 237 aa8.83□□□□□ -1
CHD3-202ENST00000358181 C1SP09871 688 aa8.83□□□□□ -1
CHD3-202ENST00000358181 CD27P26842 260 aa8.83□□□□□ -1
CHD3-202ENST00000358181 PCK2Q16822 640 aa8.83□□□□□ -1
CHD3-202ENST00000358181 IZUMO4Q1ZYL8 232 aa8.83□□□□□ -1
CHD3-202ENST00000358181 EBLN2Q6P2I7 272 aa8.83□□□□□ -1
CHD3-202ENST00000358181 LSRQ86X29 649 aaPredicted RBP8.83□□□□□ -1
CHD3-202ENST00000358181 RFESDQ8TAC1 157 aa8.83□□□□□ -1
CHD3-202ENST00000358181 ADAMTS14Q8WXS8 1223 aa8.83□□□□□ -1
CHD3-202ENST00000358181 SLC25A30Q5SVS4 291 aa8.82□□□□□ -1
CHD3-202ENST00000358181 NUDT8Q8WV74 236 aa8.82□□□□□ -1
CHD3-202ENST00000358181 TMEM171Q8WVE6 324 aa8.82□□□□□ -1
CHD3-202ENST00000358181 DYRK2Q92630 601 aa8.82□□□□□ -1
CHD3-202ENST00000358181 RAB1CQ92928 201 aa8.82□□□□□ -1
CHD3-202ENST00000358181 RCL1Q9Y2P8 373 aaKnown RBP8.82□□□□□ -1
CHD3-202ENST00000358181 IGKV6D-21A0A0A0MT36 114 aa8.82□□□□□ -1
CHD3-202ENST00000358181 LOC100289279A0A1B0GTE1 492 aa8.82□□□□□ -1
CHD3-202ENST00000358181 TOX3O15405 576 aaPredicted RBP8.82□□□□□ -1
CHD3-202ENST00000358181 PRSS2P07478 247 aa8.82□□□□□ -1
CHD3-202ENST00000358181 SHC1P29353 583 aa8.82□□□□□ -1
CHD3-202ENST00000358181 BRS3P32247 399 aa8.82□□□□□ -1
CHD3-202ENST00000358181 REEP5Q00765 189 aa8.82□□□□□ -1
CHD3-202ENST00000358181 ZNF273Q14593 569 aa8.82□□□□□ -1
CHD3-202ENST00000358181 C15orf39Q6ZRI6 1047 aa8.82□□□□□ -1
CHD3-202ENST00000358181 LILRB4Q8NHJ6 448 aa8.82□□□□□ -1
CHD3-202ENST00000358181 PELI1Q96FA3 418 aa8.82□□□□□ -1
CHD3-202ENST00000358181 PRSS16Q9NQE7 514 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms