RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 CGAP01215 116 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 DCTN2Q13561 401 aaKnown RBP7.95□□□□□ -1.14
UPF2-202ENST00000357604 CDK5R1Q15078 307 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 SGCDQ92629 289 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 GHSRQ92847 366 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 FUZQ9BT04 418 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 RIMS4Q9H426 269 aaPredicted RBP7.95□□□□□ -1.14
UPF2-202ENST00000357604 TRGV10A0A0A0MS01 117 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 FAM172BPA6NC97 362 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 SCGB2A1O75556 95 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 SOX18P35713 384 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 HCCSP53701 268 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 NKX6-1P78426 367 aaPredicted RBP7.95□□□□□ -1.14
UPF2-202ENST00000357604 BCDIN3DQ7Z5W3 292 aaKnown RBP7.95□□□□□ -1.14
UPF2-202ENST00000357604 S100ZQ8WXG8 99 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 JMJD8Q96S16 334 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 C1QTNF5Q9BXJ0 243 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 ETV7Q9Y603 341 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 LHFPL6Q9Y693 200 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 SRCAPQ6ZRS2 3230 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 GOLGA4Q13439 2230 aaKnown RBP7.95□□□□□ -1.14
UPF2-202ENST00000357604 LOC390937A0A1W2PQ73 354 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 CRHBPP24387 322 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 VBP1P61758 197 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 ABCA11PQ4W5N1 156 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 PAN3Q58A45 887 aaKnown RBP7.95□□□□□ -1.14
UPF2-202ENST00000357604 CELF2-AS1Q8N7Q2 184 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 POC5Q8NA72 575 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 DNAAF1Q8NEP3 725 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 NMNAT2Q9BZQ4 307 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 CHODLQ9H9P2 273 aa7.95□□□□□ -1.14
UPF2-202ENST00000357604 MDC1Q14676 2089 aaKnown RBP7.94□□□□□ -1.14
UPF2-202ENST00000357604 IQCF6A8MYZ5 107 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 J3QT63 122 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 SEMA7AO75326 666 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 CLPXO76031 633 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 MPIG6BO95866 241 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 GLAP06280 429 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 PLA1AQ53H76 456 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 PHYHD1Q5SRE7 291 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 RAB12Q6IQ22 244 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 UTS2BQ765I0 119 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 TMEM106AQ96A25 262 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 BARD1Q99728 777 aaKnown RBP7.94□□□□□ -1.14
UPF2-202ENST00000357604 TAS2R4Q9NYW5 299 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 DISC1C4P0D8 188 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 ADAM11O75078 769 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 CD1AP06126 327 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 GAAP10253 952 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 C21orf33P30042 268 aaPredicted RBP7.94□□□□□ -1.14
UPF2-202ENST00000357604 GTF2A1P52655 376 aaPredicted RBP7.94□□□□□ -1.14
UPF2-202ENST00000357604 EDDM3BP56851 147 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 PYDC2Q56P42 97 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 HAGHLQ6PII5 290 aaPredicted RBP7.94□□□□□ -1.14
UPF2-202ENST00000357604 B3GLCTQ6Y288 498 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 LINGO2Q7L985 606 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 LRRC75A-AS1Q8N1F1 130 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 RAB22AQ9UL26 194 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 TRAPPC2LQ9UL33 140 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 hADV38S2A0JD32 116 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 MMP16P51512 607 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 ROM1Q03395 351 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 CEACAM21Q3KPI0 293 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 ZNF57Q68EA5 555 aaPredicted RBP7.94□□□□□ -1.14
UPF2-202ENST00000357604 OR52W1Q6IF63 320 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 MZT2BQ6NZ67 158 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 FBXW12Q6X9E4 464 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 RPRMLQ8N4K4 120 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 CREB3L1Q96BA8 519 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 JKAMPQ9P055 326 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 STARD10Q9Y365 291 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 MUC6Q6W4X9 2439 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 C17orf100A8MU93 164 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 GABRPO00591 440 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 NAT2P11245 290 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 AZGP1P25311 298 aaKnown RBP7.94□□□□□ -1.14
UPF2-202ENST00000357604 ISL1P61371 349 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 HIST3H3Q16695 136 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 CLEC12BQ2HXU8 276 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 CFAP77Q6ZQR2 320 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 ZFP41Q8N8Y5 198 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 OR2V2Q96R30 315 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 TMEM59Q9BXS4 323 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 NOX4Q9NPH5 578 aa7.94□□□□□ -1.14
UPF2-202ENST00000357604 SMAD7O15105 426 aaKnown RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 ADAM20O43506 726 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 CPEP16870 476 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 ETV1P50549 477 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 IL18Q14116 193 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 EFNB3Q15768 340 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 WDR31Q8NA23 367 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 SLAMF9Q96A28 289 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 HEATR5BQ9P2D3 2071 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 PTPRZ1P23471 2315 aaPredicted RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 FAHP16930 419 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 LSM3P62310 102 aaKnown RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 HLXQ14774 488 aaPredicted RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 MOB1BQ7L9L4 216 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 OR2W3Q7Z3T1 314 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 OR13D1Q8NGV5 346 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms