RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TSEN54Q7Z6J9 526 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 RBMXL3Q8N7X1 1067 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 NAXEQ8NCW5 288 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 EXTL1Q92935 676 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 MAP1LC3BQ9GZQ8 125 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 STARD5Q9NSY2 213 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 RHBDD3Q9Y3P4 386 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 H7C1C5 153 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 GABRA1P14867 456 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 BRS3P32247 399 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 P2RY1P47900 373 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 DSC1Q08554 894 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 FA2HQ7L5A8 372 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 OR4S1Q8NGB4 309 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 WDR77Q9BQA1 342 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PKIBQ9C010 78 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TMED7-TICAM2A0A0A6YYA0 188 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 GALR2O43603 387 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 LRP3O75074 770 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 NRASP01111 189 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 KRASP01116 189 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 NME1P15531 152 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PTGFRP43088 359 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PNLIPRP2P54317 469 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PPP1CAP62136 330 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 HLA-DRB3P79483 266 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 RPL24P83731 157 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 P2RX4Q99571 388 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 FBXO34Q9NWN3 711 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 SSSCA1O60232 199 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 UBE2V2Q15819 145 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TP53I13Q8NBR0 393 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ZBTB34Q8NCN2 500 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 CD99L2Q8TCZ2 262 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ADOQ96SZ5 270 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 SMIM3Q9BZL3 60 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TRAPPC2LQ9UL33 140 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PRSS38A1L453 326 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 B4DGG1 531 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 YY2O15391 372 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 DNPH1O43598 174 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 KRTDAPP60985 99 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 RHOBP62745 196 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 C2orf27AQ580R0 203 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 RASD2Q96D21 266 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TEX37Q96LM6 180 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 NPAS1Q99742 590 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 GPR87Q9BY21 358 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PTRH2Q9Y3E5 179 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PRAMEF4O60810 478 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TIMP2P16035 220 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ABOP16442 354 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 THBS4P35443 961 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PSMB10P40306 273 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 SOX4Q06945 474 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 DMBX1Q8NFW5 382 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 DERL3Q96Q80 235 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 RAB6CQ9H0N0 254 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF768Q9H5H4 540 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 MFSD2BA6NFX1 497 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PRAMEF25A6NGN4 478 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 CCSO14618 274 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PITX1P78337 314 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF429Q86V71 674 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 OR52R1Q8NGF1 315 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 MRGPRX1Q96LB2 322 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 UQCR10Q9UDW1 63 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 URGCP-MRPS24S4R325 110 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 STRCP1A6NGW2 1772 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 CTAG2O75638 210 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ERHP84090 104 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 MOB3CQ70IA8 216 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 SSR4P51571 173 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 LINC01559Q495D7 138 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM52BQ4KMG9 183 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 NKAIN2Q5VXU1 208 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 OR5AR1Q8NGP9 310 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 OR8B4Q96RC9 309 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 HAPLN2Q9GZV7 340 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF552Q9H707 407 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 DCTN6O00399 190 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 GEMIN2O14893 280 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 SMAD9O15198 467 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 COMPP49747 757 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 SULT1A1P50225 295 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 LCN2P80188 198 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ID2Q02363 134 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 NKAIN1Q4KMZ8 207 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TNFRSF13CQ96RJ3 184 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 NMNAT3Q96T66 252 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PLEKHB1Q9UF11 243 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 CFAP20Q9Y6A4 193 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF891A8MT65 544 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 HSPB1P04792 205 aaKnown RBP5.95□□□□□ -1.46
VPS13B-202ENST00000357162 PIGPP57054 158 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 MARCH8Q5T0T0 291 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TAAR6Q96RI8 345 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TRIB1Q96RU8 372 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TUBA4BQ9H853 241 aa5.95□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM167BQ9NRX6 74 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms