RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 GPR160Q9UJ42 338 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 EDARQ9UNE0 448 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 LOC107986453A0A1B0GWG9 222 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 PLSCR5A0PG75 271 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 IRGMA1A4Y4 181 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 CD300LBA8K4G0 201 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 NCR1O76036 304 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 THBS2P35442 1172 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 PMELP40967 661 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 CRYBB2P43320 205 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 RGS6P49758 472 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 TPBGQ13641 420 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 SYT6Q5T7P8 510 aaPredicted RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 C11orf71Q6IPW1 123 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 FBXW12Q6X9E4 464 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 PGAP1Q75T13 922 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 BATF2Q8N1L9 274 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 MUC15Q8N387 334 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 NUP37Q8NFH4 326 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 MUL1Q969V5 352 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 MRPL24Q96A35 216 aaKnown RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 FGGYQ96C11 551 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 SMIM19Q96E16 107 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 MNTQ99583 582 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 GFI1Q99684 422 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 USB1Q9BQ65 265 aaKnown RBP3.43□□□□□ -1.86
LIG4-201ENST00000356922 MND1Q9BWT6 205 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 INPP5EQ9NRR6 644 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 ATPIF1Q9UII2 106 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 ABCA2Q9BZC7 2435 aa3.43□□□□□ -1.86
LIG4-201ENST00000356922 GGT3PA6NGU5 568 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 F5H5P2 479 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 F8VVB4 439 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 F8VWA3 439 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 H3BSA7 217 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 IGHV3-13P01766 116 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ERCC1P07992 297 aaPredicted RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 ADRA2CP18825 462 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 PSMB9P28065 219 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 RAD52P43351 418 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 CCL8P80075 99 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ACSM1Q08AH1 577 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 OR8B8Q15620 311 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 RPL22L1Q6P5R6 122 aaKnown RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 KCTD20Q7Z5Y7 419 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 DPPA2Q7Z7J5 298 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 SATL1Q86VE3 508 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 OR5L1Q8NGL2 311 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 OR5AK2Q8NH90 309 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 NPRL2Q8WTW4 380 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 HPSE2Q8WWQ2 592 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 HIST1H2AAQ96QV6 131 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 WACQ9BTA9 647 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 CENPOQ9BU64 300 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 PURGQ9UJV8 347 aaKnown RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 A0A0U1RQV5 110 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ZNF850A8MQ14 1090 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 HS3ST1O14792 307 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 GMDSO60547 372 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ZNF205O95201 554 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 APOC1P02654 83 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 HPXP02790 462 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 TFF1P04155 84 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ISG15P05161 165 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 CPEP16870 476 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 CCL1P22362 96 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 GADD45AP24522 165 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 APOBEC3AP31941 199 aaPredicted RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 GNALP38405 381 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 CCR9P51686 369 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 GBX2P52951 348 aaPredicted RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 LSM3P62310 102 aaKnown RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 ACTA2P62736 377 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ACTG2P63267 376 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 FAM201AQ5SY85 155 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 BCL2L15Q5TBC7 163 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 FOXB2Q5VYV0 432 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 MBNL2Q5VZF2 373 aaKnown RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 RGS7BPQ6MZT1 257 aaPredicted RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 SLC16A12Q6ZSM3 486 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 Q6ZSR3 168 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ZNF826PQ6ZT77 177 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 MRPL21Q7Z2W9 205 aaKnown RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 C1QL2Q7Z5L3 287 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ANGPTL5Q86XS5 388 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 C11orf53Q8IXP5 236 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 ZNF676Q8N7Q3 588 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 C19orf18Q8NEA5 215 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 DNAAF1Q8NEP3 725 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 SYNPRQ8TBG9 265 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 PLK3Q9H4B4 646 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 EXOSC4Q9NPD3 245 aaKnown RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 TAAR3PQ9P1P4 343 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 PIGLQ9Y2B2 252 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 PLEKHA6Q9Y2H5 1048 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 V9GYS6 101 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 PHYHO14832 338 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 SPRY3O43610 288 aa3.42□□□□□ -1.86
LIG4-201ENST00000356922 TIMM8AO60220 97 aaPredicted RBP3.42□□□□□ -1.86
LIG4-201ENST00000356922 IGHV1-46P01743 117 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms