RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 AIREO43918 545 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 FGF4P08620 206 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 ACAA1P09110 424 aaPredicted RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 DUX4L2P0CJ85 424 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 DUX4L3P0CJ86 424 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 DUX4L4P0CJ87 422 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 DUX4L5P0CJ88 424 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 DUX4L6P0CJ89 424 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 DUX4L7P0CJ90 424 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 HNRNPCL4P0DMR1 293 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 PRG2P13727 222 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 FOLR2P14207 255 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 CD36P16671 472 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 GRPRP30550 384 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 ARRB2P32121 409 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 PCP4P48539 62 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 ZNF81P51508 661 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 CLDN8P56748 225 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 MAD2L1Q13257 205 aaPredicted RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 EXOSC2Q13868 293 aaKnown RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 AARDQ4LEZ3 155 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 FAM98BQ52LJ0 330 aaKnown RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 NHLRC3Q5JS37 347 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 ANXA8L1Q5VT79 327 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 OLFML2AQ68BL7 652 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 MZT2BQ6NZ67 158 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 PAQR4Q8N4S7 273 aaPredicted RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 SLC30A7Q8NEW0 376 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 OR52E2Q8NGJ4 325 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 OR52P1PQ8NH57 321 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 ZNF431Q8TF32 576 aaPredicted RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 PPP1R36Q96LQ0 422 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 LINC00052Q96N35 136 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 FOXB1Q99853 325 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 GPR61Q9BZJ8 451 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 PPIL3Q9H2H8 161 aaKnown RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 CACYBPQ9HB71 228 aaKnown RBP9.46□□□□□ -0.9
RTN3-204ENST00000354497 NKIRAS2Q9NYR9 191 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 DUX4Q9UBX2 424 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 U3KQV3 271 aa9.46□□□□□ -0.9
RTN3-204ENST00000354497 NOTCH1P46531 2555 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 CDHR4A6H8M9 788 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 ZNF726A6NNF4 738 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 TRAPPC2LH3BP13 241 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 RGS10O43665 173 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 NPIPB7O75200 414 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 CLIC3O95833 236 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 IGHMP01871 453 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 SBK2P0C263 348 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 IGHV4-38-2P0DP08 117 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 RPS4Y1P22090 263 aaKnown RBP9.45□□□□□ -0.9
RTN3-204ENST00000354497 PAX6P26367 422 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 GPX4P36969 197 aaPredicted RBP9.45□□□□□ -0.9
RTN3-204ENST00000354497 ACAA2P42765 397 aaKnown RBP9.45□□□□□ -0.9
RTN3-204ENST00000354497 ANXA11P50995 505 aaKnown RBP9.45□□□□□ -0.9
RTN3-204ENST00000354497 RELBQ01201 579 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 SLC3A1Q07837 685 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 HNRNPA0Q13151 305 aaKnown RBP9.45□□□□□ -0.9
RTN3-204ENST00000354497 CDK5R2Q13319 367 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 METAP1DQ6UB28 335 aaPredicted RBP9.45□□□□□ -0.9
RTN3-204ENST00000354497 PLET1Q6UQ28 207 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 ZNF584Q8IVC4 421 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 ZNF519Q8TB69 540 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 CITED1Q99966 193 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 ANKRD19PQ9H560 264 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 PLCXD1Q9NUJ7 323 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 RBFOX1Q9NWB1 397 aaKnown RBP9.45□□□□□ -0.9
RTN3-204ENST00000354497 RPS6KB2Q9UBS0 482 aa9.45□□□□□ -0.9
RTN3-204ENST00000354497 ZNF443Q9Y2A4 671 aaPredicted RBP9.45□□□□□ -0.9
RTN3-204ENST00000354497 IGLV3-9A0A075B6K5 115 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 PPIAL4EA0A075B759 164 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 A0A0B4J293 547 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 PPIAL4CA0A0B4J2A2 164 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 IQCMA0A1B0GVH7 501 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 C9orf170A2RU37 121 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 PPIAL4DF5H284 164 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 MRASO14807 208 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 PIN1P1O15428 100 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 NPHS1O60500 1241 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 TSPAN15O95858 294 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 SERPINA5P05154 406 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 PPIAL4FP0DN26 164 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 HLA-DOBP13765 273 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 MSX2P35548 267 aaPredicted RBP9.44□□□□□ -0.9
RTN3-204ENST00000354497 TGM4P49221 684 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 CAPZA1P52907 286 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 SEC61A1P61619 476 aaKnown RBP9.44□□□□□ -0.9
RTN3-204ENST00000354497 HOXC5Q00444 222 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 DHODHQ02127 395 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 EMX2Q04743 252 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 NFYCQ13952 458 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 THEM4Q5T1C6 240 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 ASPHD2Q6ICH7 369 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 LIN54Q6MZP7 749 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 H1FNTQ75WM6 255 aaPredicted RBP9.44□□□□□ -0.9
RTN3-204ENST00000354497 SERPINA11Q86U17 422 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 C12orf45Q8N5I9 185 aaPredicted RBP9.44□□□□□ -0.9
RTN3-204ENST00000354497 BVESQ8NE79 360 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms