RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 KIR2DS1Q14954 304 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 SPSB2Q99619 263 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 SRRQ9GZT4 340 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 RIMS4Q9H426 269 aaPredicted RBP10.84□□□□□ -0.67
SMAD9-201ENST00000350148 PLA2G3Q9NZ20 509 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 ANAPC1Q9H1A4 1944 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 IGHV3-15A0A0B4J1V0 119 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 OR7C1O76099 320 aaPredicted RBP10.84□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF16P17020 682 aaPredicted RBP10.84□□□□□ -0.67
SMAD9-201ENST00000350148 IL13RA1P78552 427 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 PCK2Q16822 640 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 SLC22A25Q6T423 547 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 C16orf47Q6ZP98 133 aaPredicted RBP10.84□□□□□ -0.67
SMAD9-201ENST00000350148 DVL2O14641 736 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 XRCC3O43542 346 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 CCL3P10147 92 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 CTLA4P16410 223 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 PCOLCEQ15113 449 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 FAM209BQ5JX69 171 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 CD276Q5ZPR3 534 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 ASB13Q8WXK3 278 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 SLC7A6Q92536 515 aa10.84□□□□□ -0.67
SMAD9-201ENST00000350148 CENPVL1A0A0U1RR11 272 aa10.83□□□□□ -0.67
SMAD9-201ENST00000350148 NPIPB9F8W1W9 429 aa10.83□□□□□ -0.67
SMAD9-201ENST00000350148 LALBAP00709 142 aa10.83□□□□□ -0.67
SMAD9-201ENST00000350148 C1QCP02747 245 aa10.83□□□□□ -0.67
SMAD9-201ENST00000350148 OR2M7Q8NG81 312 aa10.83□□□□□ -0.67
SMAD9-201ENST00000350148 FNDC9Q8TBE3 224 aa10.83□□□□□ -0.67
SMAD9-201ENST00000350148 SCGB1C1Q8TD33 95 aa10.83□□□□□ -0.67
SMAD9-201ENST00000350148 DERL3Q96Q80 235 aa10.83□□□□□ -0.67
SMAD9-201ENST00000350148 CGGBP1Q9UFW8 167 aaPredicted RBP10.83□□□□□ -0.67
SMAD9-201ENST00000350148 SHISA8B8ZZ34 492 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 EPPINO95925 133 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 APOA2P02652 100 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 RFX2P48378 723 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
SMAD9-201ENST00000350148 SSX8Q7RTT4 187 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 PXT1Q8NFP0 134 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 GPA33Q99795 319 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 HRH4Q9H3N8 390 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 NECAP2Q9NVZ3 263 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 SEMA5BQ9P283 1151 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 SLC23A1Q9UHI7 598 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 POMT1Q9Y6A1 747 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 GLAP06280 429 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 PTGER4P35408 488 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 UCNP55089 124 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 FOXC1Q12948 553 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 IKZF1Q13422 519 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 ADAM5Q6NVV9 412 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF695Q8IW36 515 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 CMTM4Q8IZR5 234 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 CPEB3Q8NE35 698 aaKnown RBP10.83□□□□□ -0.68
SMAD9-201ENST00000350148 GIMAP1Q8WWP7 306 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 PIGTQ969N2 578 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 DYNLRB1Q9NP97 96 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 A0A1W2PNV4 684 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 FTH1P19P0C7X4 201 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 SLC2A1P11166 492 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 COX6A1P12074 109 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 SMIM4Q8WVI0 70 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 APOBEC4Q8WW27 367 aaKnown RBP10.83□□□□□ -0.68
SMAD9-201ENST00000350148 BOD1Q96IK1 185 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 RNF170Q96K19 258 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 CRLF2Q9HC73 371 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 HS3ST3B1Q9Y662 390 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 EEF1E1-BLOC1S5C9J1V9 151 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 ZDHHC23Q8IYP9 409 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 HSD17B8Q92506 261 aa10.83□□□□□ -0.68
SMAD9-201ENST00000350148 C20orf202A1L168 122 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 GLSO94925 669 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-201ENST00000350148 B4GALT1P15291 398 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 MFGE8Q08431 387 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-201ENST00000350148 GPR157Q5UAW9 335 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 LSRQ86X29 649 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-201ENST00000350148 SMAP2Q8WU79 429 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-201ENST00000350148 TOLLIPQ9H0E2 274 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 GPR173Q9NS66 373 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 PLXNA4Q9HCM2 1894 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 SP1P08047 785 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 SYT9Q86SS6 491 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 OR13C5Q8NGS8 318 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 SEC22CQ9BRL7 303 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 GSX2Q9BZM3 304 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 MRM2Q9UI43 246 aaKnown RBP10.82□□□□□ -0.68
SMAD9-201ENST00000350148 DHRS3O75911 302 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 SCAF4O95104 1147 aaKnown RBP10.82□□□□□ -0.68
SMAD9-201ENST00000350148 ZFPL1O95159 310 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 IFNA5P01569 189 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 IGHMP01871 453 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 SERPINE2P07093 398 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 RAB13P51153 203 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF718Q3SXZ3 478 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 PDZD11Q5EBL8 140 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 HGDQ93099 445 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 TOMM40LQ969M1 308 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 NKX3-1Q99801 234 aaPredicted RBP10.82□□□□□ -0.68
SMAD9-201ENST00000350148 KCNE5Q9UJ90 142 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms