RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 A0A0A6YYD4 124 aa17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 ARGFXA6NJG6 315 aa17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 DHRS7CA6NNS2 312 aa17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 PCBD1P61457 104 aa17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 CRIP3Q6Q6R5 217 aa17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 TMEM251Q8N6I4 163 aa17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 SLC6A15Q9H2J7 730 aa17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 CA10Q9NS85 328 aa17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 KLF13Q9Y2Y9 288 aaPredicted RBP17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 NOSIPQ9Y314 301 aaKnown RBP17.8■□□□□ 0.44
CHRNA3-202ENST00000348639 CDK2AP1O14519 115 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 SP1P08047 785 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 PTGFRP43088 359 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 PSG4Q00888 419 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 SFRP5Q5T4F7 317 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 PLXDC2Q6UX71 529 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 BPIFB2Q8N4F0 458 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 MDS2Q8NDY4 140 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 OR4S1Q8NGB4 309 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 NUDCD2Q8WVJ2 157 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 GPR137Q96N19 417 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 ASPMQ8IZT6 3477 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 DMXL1Q9Y485 3027 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 G3V3Q6 166 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 NME2P1O60361 137 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 MRPL33O75394 65 aaKnown RBP17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 OR2A4O95047 310 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 GSTP1P09211 210 aaKnown RBP17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 GIPP09681 153 aaPredicted RBP17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 NME2P22392 152 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 HGFACQ04756 655 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 NRN1LQ496H8 165 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 SLC16A14Q7RTX9 510 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 AKR7LQ8NHP1 331 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 OR2A7Q96R45 310 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 SLC6A7Q99884 636 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 URM1Q9BTM9 101 aaKnown RBP17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 OR2H1Q9GZK4 316 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 BANF2Q9H503 90 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 SLC2A8Q9NY64 477 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 PIPOXQ9P0Z9 390 aa17.79■□□□□ 0.44
CHRNA3-202ENST00000348639 PRR33A8MZF0 331 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 DISC1C4P0D8 188 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 CRTAPO75718 401 aaPredicted RBP17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 PATE4P0C8F1 98 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 NAT2P11245 290 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 MPZP25189 248 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 RNASE10Q5GAN6 216 aaKnown RBP17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 DMRTC1Q5HYR2 192 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 GVQW1Q8N7I0 195 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 SEMA6DQ8NFY4 1073 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 OR56B1Q8NGI3 324 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 LILRB4Q8NHJ6 448 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 CCDC107Q8WV48 283 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 HAS2Q92819 552 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 RAB3CQ96E17 227 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 LINC00470Q9BZP3 86 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 CHST6Q9GZX3 395 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 CST11Q9H112 138 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 WNT5BQ9H1J7 359 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 POFUT1Q9H488 388 aa17.78■□□□□ 0.44
CHRNA3-202ENST00000348639 TMEM82A0PJX8 343 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 SOCS1O15524 211 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 SYNGR4O95473 234 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 HIST1H1DP16402 221 aaKnown RBP17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 HTR5AP47898 357 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 RSPO4Q2I0M5 234 aaPredicted RBP17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 SLC22A6Q4U2R8 563 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 TSPO2Q5TGU0 170 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 SKA3Q8IX90 412 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 MUC20Q8N307 709 aaPredicted RBP17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 FGFBP3Q8TAT2 258 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 NPRL2Q8WTW4 380 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 REEP6Q96HR9 211 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 PRRT1Q99946 306 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 CHIAQ9BZP6 476 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 MYOZ1Q9NP98 299 aaPredicted RBP17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 IFT46Q9NQC8 304 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 PARPBPQ9NWS1 579 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 KCNK7Q9Y2U2 307 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 RTTNQ86VV8 2226 aa17.77■□□□□ 0.44
CHRNA3-202ENST00000348639 A0A1W2PP11 408 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 OR14I1A6ND48 311 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 KLRC4-KLRK1H3BQV0 150 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 SSX5O60225 188 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 S100A1P23297 94 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 CD82P27701 267 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 MEOX1P50221 254 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 RAP2BP61225 183 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 PLAC9Q5JTB6 97 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 VASH2Q86V25 355 aa17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 MCTS1Q9ULC4 181 aaKnown RBP17.77■□□□□ 0.43
CHRNA3-202ENST00000348639 FARS2O95363 451 aaKnown RBP17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 IGHV3-9P01782 118 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 LCATP04180 440 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 FCGR2AP12318 317 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 TBPP20226 339 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 TMEM50BP56557 158 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 GNG2P59768 71 aa17.76■□□□□ 0.43
CHRNA3-202ENST00000348639 RPS27AP62979 156 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms