RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 FBXO4Q9UKT5 387 aa16.69■□□□□ 0.26
UBE3C-201ENST00000348165 PAPPAQ13219 1627 aa16.69■□□□□ 0.26
UBE3C-201ENST00000348165 COL4A1P02462 1669 aa16.69■□□□□ 0.26
UBE3C-201ENST00000348165 SPTBN2O15020 2390 aa16.69■□□□□ 0.26
UBE3C-201ENST00000348165 UNC13CQ8NB66 2214 aa16.69■□□□□ 0.26
UBE3C-201ENST00000348165 LINC01387J3KSC0 135 aa16.69■□□□□ 0.26
UBE3C-201ENST00000348165 GPM6AP51674 278 aa16.69■□□□□ 0.26
UBE3C-201ENST00000348165 TMEM268Q5VZI3 342 aa16.69■□□□□ 0.26
UBE3C-201ENST00000348165 ZFP92A6NM28 416 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 TRIM77I1YAP6 450 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 SCAF4O95104 1147 aaKnown RBP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 TOMM34Q15785 309 aaPredicted RBP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 PATZ1Q9HBE1 687 aaKnown RBP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 LHX9Q9NQ69 397 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 RPL11P62913 178 aaKnown RBP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 SNRPNP63162 240 aaKnown RBP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 NAA40Q86UY6 237 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 NINQ8N4C6 2090 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 SERTM1A2A2V5 107 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 PATE3B3GLJ2 98 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 SPRY3O43610 288 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 POU2F2P09086 479 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 B3GNTL1Q67FW5 361 aaPredicted RBP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 OR2A2Q6IF42 318 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 RNF165Q6ZSG1 346 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 CXorf67Q86X51 503 aaPredicted RBP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 OR2AK2Q8NG84 335 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 NEU3Q9UQ49 428 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 KPTNQ9Y664 436 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 M0R296 226 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 GABRB1P18505 474 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 TIAL1Q01085 375 aaKnown RBP eCLIP16.68■□□□□ 0.26
UBE3C-201ENST00000348165 KHDC1LQ5JSQ8 128 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 THSD4Q6ZMP0 1018 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 DTWD2Q8NBA8 298 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 S1PR3Q99500 378 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 CLEC1BQ9P126 229 aa16.68■□□□□ 0.26
UBE3C-201ENST00000348165 ARPC3O15145 178 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 THBS3P49746 956 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 PDCD1Q15116 288 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 PRSS42Q7Z5A4 293 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 CFHR5Q9BXR6 569 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 TAF9BQ9HBM6 251 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 POLR2AP24928 1970 aaKnown RBP16.67■□□□□ 0.26
UBE3C-201ENST00000348165 BMP5P22003 454 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 GPNMBQ14956 572 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 OR10D3Q8NH80 312 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 AQP7O14520 342 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 TNFSF14O43557 240 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 FUT6P51993 359 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 ZNF85Q03923 595 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 SCGB2A2Q13296 93 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 FBXL14Q8N1E6 418 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 FAM117AQ9C073 453 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 COL4A5P29400 1685 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 TRIP12Q14669 1992 aaPredicted RBP16.67■□□□□ 0.26
UBE3C-201ENST00000348165 SLC17A2O00624 439 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 GUCA2AQ02747 115 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 WDR38Q5JTN6 314 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 MAMSTRQ6ZN01 415 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 CARFQ8N187 725 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 GALNT16Q8N428 558 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 YIPF5Q969M3 257 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 PELI1Q96FA3 418 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 OPA3Q9H6K4 179 aa16.67■□□□□ 0.26
UBE3C-201ENST00000348165 NPBWR1P48145 328 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 GNB2P62879 340 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 THNSL2Q86YJ6 484 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 PP6455Q8WZ26 134 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 PLPPR2Q96GM1 343 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 MOGAT1Q96PD6 335 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 ABCD4O14678 606 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 KCNRGQ8N5I3 272 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 UBALD1Q8TB05 177 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 TRIP11Q15643 1979 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 A0A1B0GTH9 108 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 CLEC3BP05452 202 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 GIPP09681 153 aaPredicted RBP16.66■□□□□ 0.26
UBE3C-201ENST00000348165 ATF1P18846 271 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 CDKN2AP42771 156 aaKnown RBP16.66■□□□□ 0.26
UBE3C-201ENST00000348165 SLC25A1P53007 311 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 TXN2Q99757 166 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 NIPSNAP3BQ9BS92 247 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 GNB4Q9HAV0 340 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 ZNF71Q9NQZ8 489 aaPredicted RBP16.66■□□□□ 0.26
UBE3C-201ENST00000348165 CDC42EP2O14613 210 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 HLA-DOBP13765 273 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 COTL1Q14019 142 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 INSL4Q14641 139 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 OR2T2Q6IF00 324 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 GLCCI1Q86VQ1 547 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 CMTM2Q8TAZ6 248 aa16.66■□□□□ 0.26
UBE3C-201ENST00000348165 A0A0A6YYJ9 748 aa16.65■□□□□ 0.26
UBE3C-201ENST00000348165 TUBAL3A6NHL2 446 aa16.65■□□□□ 0.26
UBE3C-201ENST00000348165 ZFPL1O95159 310 aa16.65■□□□□ 0.26
UBE3C-201ENST00000348165 PNPP00491 289 aa16.65■□□□□ 0.26
UBE3C-201ENST00000348165 HABP2Q14520 560 aaPredicted RBP16.65■□□□□ 0.26
UBE3C-201ENST00000348165 SPINK14Q6IE38 97 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms