RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 KIRREL2Q6UWL6 708 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 OR51F2Q8NH61 342 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 WNT2BQ93097 391 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 HCSTQ9UBK5 93 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 TNFSF18Q9UNG2 199 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 H3BQ15 152 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 EFSO43281 561 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 WDR1O75083 606 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 C17orf67Q0P5P2 114 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 CYB5R2Q6BCY4 276 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 DPPA3Q6W0C5 159 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 RNF165Q6ZSG1 346 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 UBE3DQ7Z6J8 389 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 DTD1Q8TEA8 209 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 S1PR5Q9H228 398 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF552Q9H707 407 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-202ENST00000345356 PRRC2BQ5JSZ5 2229 aaKnown RBP10.91□□□□□ -0.66
COL12A1-202ENST00000345356 SERPINE3A8MV23 424 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 FCN1O00602 326 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 CD22P20273 847 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF154Q13106 437 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 TMPRSS11FQ6ZWK6 438 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 OR8B4Q96RC9 309 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 ZFP64Q9NPA5 681 aa10.91□□□□□ -0.66
COL12A1-202ENST00000345356 A0A1B0GUL6 1792 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 PQLC2LA1A4F0 135 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 FAM24AA6NFZ4 105 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 GCH1P30793 250 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 POLR2GP62487 172 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF813Q6ZN06 617 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 GVQW1Q8N7I0 195 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 BCORP1Q8N888 145 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 OR2T10Q8NGZ9 312 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 MYEOVQ96EZ4 313 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 NRSN2Q9GZP1 204 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 SIRT7Q9NRC8 400 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 PRR13Q9NZ81 148 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 KCNE1BA0A087WTH5 132 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 A0A1B0GTH9 108 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 MAP1LC3B2A6NCE7 125 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 GLULP15104 373 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 METRNLQ641Q3 311 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL12A1-202ENST00000345356 TMEM91Q6ZNR0 172 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 MAP1LC3BQ9GZQ8 125 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 KCNK15Q9H427 330 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 PARP11Q9NR21 331 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 PEX11BO96011 259 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 FAHD2BQ6P2I3 314 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-202ENST00000345356 C19orf47Q8N9M1 422 aaKnown RBP10.9□□□□□ -0.66
COL12A1-202ENST00000345356 OTOSQ8NHW6 89 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 FAHD2AQ96GK7 314 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 VN1R1Q9GZP7 353 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 B9D1Q9UPM9 204 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 PAM16Q9Y3D7 125 aa10.9□□□□□ -0.66
COL12A1-202ENST00000345356 CLEC18AA5D8T8 446 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 C2orf72A6NCS6 295 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 CXorf65A6NEN9 183 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 MPTX1A8MV57 137 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 TBX19O60806 448 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 AAED1Q7RTV5 226 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 CLEC18CQ8NCF0 446 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 OR4N2Q8NGD1 307 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 SFXN1Q9H9B4 322 aa10.9□□□□□ -0.67
COL12A1-202ENST00000345356 TOPAZ1Q8N9V7 1692 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 TRBV5-3A0A0A0MS03 114 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 DUXBA0A1W2PPF3 345 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 FAM166BA8MTA8 275 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 SIAH2O43255 324 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 SPINK4O60575 86 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 AMTP48728 403 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 NHLRC3Q5JS37 347 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 COL5A1-AS1Q5SY13 56 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 RNASEKQ6P5S7 137 aaKnown RBP10.89□□□□□ -0.67
COL12A1-202ENST00000345356 YTHDF2Q9Y5A9 579 aaKnown RBP10.89□□□□□ -0.67
COL12A1-202ENST00000345356 NUP205Q92621 2012 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 EIF4E2O60573 245 aaKnown RBP10.89□□□□□ -0.67
COL12A1-202ENST00000345356 ZNF737O75373 536 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 RPL24P83731 157 aaKnown RBP10.89□□□□□ -0.67
COL12A1-202ENST00000345356 FOXO1Q12778 655 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 BSXQ3C1V8 233 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 DCAF12L2Q5VW00 463 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 HSF4Q9ULV5 492 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 FUT9Q9Y231 359 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 LRP12Q9Y561 859 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 B4DEV8 164 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 FFAR1O14842 300 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 NXPH2O95156 264 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-202ENST00000345356 TMEM267Q0VDI3 215 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-202ENST00000345356 OR8G1Q15617 311 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 Q5BKY6 102 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 GSN-AS1Q9NRJ2 163 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 PRAMEF25A6NGN4 478 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 ZFAND5O76080 213 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 SEMG1P04279 462 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 PRAMEF5Q5TYX0 476 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 PRAMEF6Q5VXH4 476 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 OR2C3Q8N628 320 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms