RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ARID1AO14497 2285 aa14.59□□□□□ -0.07
SMARCA4-201ENST00000344626 MAGEB4O15481 346 aaPredicted RBP14.59□□□□□ -0.07
SMARCA4-201ENST00000344626 EPPINO95925 133 aa14.59□□□□□ -0.07
SMARCA4-201ENST00000344626 DEFA4P12838 97 aa14.59□□□□□ -0.07
SMARCA4-201ENST00000344626 TSC22D1Q15714 1073 aa14.59□□□□□ -0.07
SMARCA4-201ENST00000344626 WDSUB1Q8N9V3 476 aa14.59□□□□□ -0.07
SMARCA4-201ENST00000344626 ZMAT3Q9HA38 289 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-201ENST00000344626 CHST2Q9Y4C5 530 aa14.59□□□□□ -0.07
SMARCA4-201ENST00000344626 AHRRA9YTQ3 701 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 GABARAPH6UMI1 98 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 HSD17B6O14756 317 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 RER1O15258 196 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 PHF1O43189 567 aaPredicted RBP14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 TNFAIP6P98066 277 aaPredicted RBP14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 RHEBQ15382 184 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 OR2T2Q6IF00 324 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 SLC39A7Q92504 469 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 RAB1CQ92928 201 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 MOGAT1Q96PD6 335 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 ST3GAL6Q9Y274 331 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 DTX4Q9Y2E6 619 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 UGT2A1Q9Y4X1 527 aa14.58□□□□□ -0.07
SMARCA4-201ENST00000344626 TSPAN9O75954 239 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 HTR2AP28223 471 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 PDLIM3Q53GG5 364 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 STAC2Q6ZMT1 411 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 SLC35G3Q8N808 338 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 BEST4Q8NFU0 473 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 C4orf45Q96LM5 186 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 KIF25Q9UIL4 384 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 LSM6P62312 80 aaKnown RBP14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 EDARADDQ8WWZ3 215 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 NTN4Q9HB63 628 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 AQP8O94778 261 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 UCN2Q96RP3 112 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 NTMQ9P121 344 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 TAAR3PQ9P1P4 343 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 ICAM5Q9UMF0 924 aa14.58□□□□□ -0.08
SMARCA4-201ENST00000344626 B8ZZF3 427 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 TO15178 435 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 SUB1P53999 127 aaKnown RBP eCLIP14.57□□□□□ -0.082e-7■■■□□ 15.7
SMARCA4-201ENST00000344626 DBPQ10586 325 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 TSEN54Q7Z6J9 526 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 LGI3Q8N145 548 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 OR2AE1Q8NHA4 323 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 C9orf172C9J069 976 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 DHRS3O75911 302 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 CST2P09228 141 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 ACSM1Q08AH1 577 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 TPBGQ13641 420 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 OR2AK2Q8NG84 335 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 SMAP2Q8WU79 429 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 ELMOD3Q96FG2 381 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 TAS2R3Q9NYW6 316 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 FLRT3Q9NZU0 649 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 MSTNO14793 375 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 NTN1O95631 604 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 IFNA10P01566 189 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 BCL2A1Q16548 175 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 OR6K3Q8NGY3 331 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 ZNF416Q9BWM5 594 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 A0A1W2PPV4 95 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 OR6C68A6NDL8 312 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 INPP5JQ15735 1006 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 ZAR1Q86SH2 424 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 ARHGEF39Q8N4T4 335 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 SHARPINQ9H0F6 387 aa14.57□□□□□ -0.08
SMARCA4-201ENST00000344626 COX6A1P12074 109 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 RPS19P39019 145 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 RAB13P51153 203 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 SPACA5Q96QH8 159 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 NMNAT2Q9BZQ4 307 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 UNKLQ9H9P5 680 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 TAF9Q16594 264 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 ST8SIA4Q92187 359 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 MRPS24Q96EL2 167 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 IFITM5A6NNB3 132 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 C17orf112F2Z3M2 114 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 CDKN2AP42771 156 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 HBG1P69891 147 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 HBG2P69892 147 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 FBXW9Q5XUX1 488 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 INO80CQ6PI98 192 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 OR2B2Q9GZK3 357 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 ISG20L2Q9H9L3 353 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 ARPC5O15511 151 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 FABP1P07148 127 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 H2BFWTQ7Z2G1 175 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 CMBLQ96DG6 245 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 SSUH2Q9Y2M2 353 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 M0QYG6 137 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 C2orf76Q3KRA6 126 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 CXXC4Q9H2H0 198 aa14.56□□□□□ -0.08
SMARCA4-201ENST00000344626 MGMTP16455 207 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 KITLGP21583 273 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 ALDH3B2P48448 385 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 CLDN20P56880 219 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 MFFQ9GZY8 342 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 CCR9P51686 369 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 SEH1LQ96EE3 360 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms