RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 IGF2-ASQ6U949 168 aa13.01□□□□□ -0.33
PBX3-201ENST00000342287 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.01□□□□□ -0.33
PBX3-201ENST00000342287 OR51S1Q8NGJ8 323 aa13.01□□□□□ -0.33
PBX3-201ENST00000342287 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
PBX3-201ENST00000342287 ARL11Q969Q4 196 aa13.01□□□□□ -0.33
PBX3-201ENST00000342287 ISG20L2Q9H9L3 353 aaKnown RBP13.01□□□□□ -0.33
PBX3-201ENST00000342287 SRA1Q9HD15 236 aaKnown RBP13.01□□□□□ -0.33
PBX3-201ENST00000342287 ZIC3O60481 467 aa13□□□□□ -0.33
PBX3-201ENST00000342287 CYTIPO60759 359 aa13□□□□□ -0.33
PBX3-201ENST00000342287 OR8G3PP0DMU2 310 aa13□□□□□ -0.33
PBX3-201ENST00000342287 DNASE1L1P49184 302 aa13□□□□□ -0.33
PBX3-201ENST00000342287 MTNR1BP49286 362 aa13□□□□□ -0.33
PBX3-201ENST00000342287 MRPS10P82664 201 aaKnown RBP13□□□□□ -0.33
PBX3-201ENST00000342287 BDH1Q02338 343 aa13□□□□□ -0.33
PBX3-201ENST00000342287 CLN3Q13286 438 aa13□□□□□ -0.33
PBX3-201ENST00000342287 LINC01590Q5TEZ4 76 aa13□□□□□ -0.33
PBX3-201ENST00000342287 SFXN4Q6P4A7 337 aa13□□□□□ -0.33
PBX3-201ENST00000342287 ZNF519Q8TB69 540 aa13□□□□□ -0.33
PBX3-201ENST00000342287 TSSK2Q96PF2 358 aa13□□□□□ -0.33
PBX3-201ENST00000342287 OR5B2Q96R09 309 aa13□□□□□ -0.33
PBX3-201ENST00000342287 TIMP4Q99727 224 aa13□□□□□ -0.33
PBX3-201ENST00000342287 OR51B6Q9H340 312 aa13□□□□□ -0.33
PBX3-201ENST00000342287 TMEM138Q9NPI0 162 aa13□□□□□ -0.33
PBX3-201ENST00000342287 HDGFL3Q9Y3E1 203 aa13□□□□□ -0.33
PBX3-201ENST00000342287 ACOD1A6NK06 481 aa13□□□□□ -0.33
PBX3-201ENST00000342287 PROB1E7EW31 1015 aa13□□□□□ -0.33
PBX3-201ENST00000342287 H7C1C5 153 aa13□□□□□ -0.33
PBX3-201ENST00000342287 SULT2B1O00204 365 aa13□□□□□ -0.33
PBX3-201ENST00000342287 EREGO14944 169 aa13□□□□□ -0.33
PBX3-201ENST00000342287 SC5DO75845 299 aa13□□□□□ -0.33
PBX3-201ENST00000342287 IFNA2P01563 188 aa13□□□□□ -0.33
PBX3-201ENST00000342287 NPSP0C0P6 89 aa13□□□□□ -0.33
PBX3-201ENST00000342287 RAB5AP20339 215 aa13□□□□□ -0.33
PBX3-201ENST00000342287 ACKR3P25106 362 aa13□□□□□ -0.33
PBX3-201ENST00000342287 PYCR1P32322 319 aa13□□□□□ -0.33
PBX3-201ENST00000342287 CASRP41180 1078 aa13□□□□□ -0.33
PBX3-201ENST00000342287 CARD18P57730 90 aa13□□□□□ -0.33
PBX3-201ENST00000342287 LCN6P62502 163 aa13□□□□□ -0.33
PBX3-201ENST00000342287 ZNF85Q03923 595 aa13□□□□□ -0.33
PBX3-201ENST00000342287 TMEM176BQ3YBM2 270 aaPredicted RBP13□□□□□ -0.33
PBX3-201ENST00000342287 FOXRED2Q8IWF2 684 aa13□□□□□ -0.33
PBX3-201ENST00000342287 KDM8Q8N371 416 aa13□□□□□ -0.33
PBX3-201ENST00000342287 SMAP2Q8WU79 429 aaPredicted RBP13□□□□□ -0.33
PBX3-201ENST00000342287 C5orf34Q96MH7 638 aa13□□□□□ -0.33
PBX3-201ENST00000342287 LRFN1Q9P244 771 aa13□□□□□ -0.33
PBX3-201ENST00000342287 PRSS37A4D1T9 235 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 MT-ND5P03915 603 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 OPN1LWP04000 364 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 NAA10P41227 235 aaPredicted RBP12.99□□□□□ -0.33
PBX3-201ENST00000342287 NDUFA6P56556 154 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 ODF4Q2M2E3 257 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 SLC25A35Q3KQZ1 300 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 LINC00303Q3SY05 128 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 PDZD11Q5EBL8 140 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 TMPRSS7Q7RTY8 843 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 SLC35F2Q8IXU6 374 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 OR4A4PQ8NGN8 299 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 SYT4Q9H2B2 425 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 PARPBPQ9NWS1 579 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 NPIPB13A6NJU9 1138 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 FAM171A2A8MVW0 826 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 NPIPB4C9JG80 1138 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 HOXB5P09067 269 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 HLA-DOBP13765 273 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 HOXA5P20719 270 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 SFTPDP35247 375 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 CDX1P47902 265 aaPredicted RBP12.99□□□□□ -0.33
PBX3-201ENST00000342287 SCGB2B2Q4G0G5 96 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 RAET1LQ5VY80 246 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 LINGO2Q7L985 606 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 PXKQ7Z7A4 578 aa12.99□□□□□ -0.33
PBX3-201ENST00000342287 CPEB3Q8NE35 698 aaKnown RBP12.99□□□□□ -0.33
PBX3-201ENST00000342287 UTP23Q9BRU9 249 aaKnown RBP12.99□□□□□ -0.33
PBX3-201ENST00000342287 DCTN6O00399 190 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 LIPCP11150 499 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 ZNF17P17021 662 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 DAP3P51398 398 aaKnown RBP12.98□□□□□ -0.33
PBX3-201ENST00000342287 CXADRP78310 365 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 ATXN7L3Q14CW9 347 aaPredicted RBP12.98□□□□□ -0.33
PBX3-201ENST00000342287 SPINK14Q6IE38 97 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 ADPRHL1Q8NDY3 354 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 TNFAIP8L1Q8WVP5 186 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 MAFIPQ8WZ33 124 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 ACKR4Q9NPB9 350 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 TRIM36Q9NQ86 728 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 A0A0G2JMM0 328 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 A0A1W2PNR3 127 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 A0A1W2PPB8 328 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 A0A1W2PRS3 328 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 A6NIZ1 184 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 KIR3DP1A8MWS1 328 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 NPIPA5E9PKD4 350 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 SNRPBP14678 240 aaKnown RBP12.98□□□□□ -0.33
PBX3-201ENST00000342287 DAOP14920 347 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 SRD5A2P31213 254 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 RAP1BP61224 184 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 RAP1AP62834 184 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 HSF1Q00613 529 aa12.98□□□□□ -0.33
PBX3-201ENST00000342287 KIAA0141Q14154 515 aaPredicted RBP12.98□□□□□ -0.33
PBX3-201ENST00000342287 FAM24BQ8N5W8 94 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms