RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SLC22A13Q9Y226 551 aa16.47■□□□□ 0.23
SMPD1-201ENST00000342245 PGA4P0DJD7 388 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 PGA5P0DJD9 388 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 PPP1CCP36873 323 aaKnown RBP16.46■□□□□ 0.23
SMPD1-201ENST00000342245 ECI1P42126 302 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 OR3A1P47881 315 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 RAB28P51157 221 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 CTXN1P60606 82 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 BTG2P78543 158 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 TRMT12Q53H54 448 aaKnown RBP16.46■□□□□ 0.23
SMPD1-201ENST00000342245 ALG10Q5BKT4 473 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 SLC18B1Q6NT16 456 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 LHFPL1Q86WI0 220 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 CATSPERDQ86XM0 798 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 LRRC75AQ8NAA5 344 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 OR10G4Q8NGN3 311 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 FAM213BQ8TBF2 198 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 NRTNQ99748 197 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 IL17BQ9UHF5 180 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 PPP5D1E7EU14 171 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 K7ESM1 405 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 SLC35G4P0C7Q5 338 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 RPS2P15880 293 aaKnown RBP16.46■□□□□ 0.23
SMPD1-201ENST00000342245 GABRA3P34903 492 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 FHITP49789 147 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 EMDP50402 254 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 COL9A2Q14055 689 aaPredicted RBP16.46■□□□□ 0.23
SMPD1-201ENST00000342245 OR13C3Q8NGS6 347 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 OR5H2Q8NGV7 314 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 ACY3Q96HD9 319 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 RNF186Q9NXI6 227 aa16.46■□□□□ 0.23
SMPD1-201ENST00000342245 CDC14BO60729 498 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 OPN1MWP04001 364 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 OPN1MW2P0DN77 364 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 OPN1MW3P0DN78 364 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 APOBEC1P41238 236 aaKnown RBP16.45■□□□□ 0.22
SMPD1-201ENST00000342245 GABRA4P48169 554 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 HLA-DRB3P79483 266 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 INSM1Q01101 510 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-201ENST00000342245 SPOCK1Q08629 439 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 FAM189A2Q15884 450 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 SEMA6DQ8NFY4 1073 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 OR4D6Q8NGJ1 314 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 ERGIC1Q969X5 290 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 SYT3Q9BQG1 590 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 SRPK3Q9UPE1 567 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 RHBDD3Q9Y3P4 386 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 GNB3P16520 340 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 PAX5Q02548 391 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 MFGE8Q08431 387 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-201ENST00000342245 C1orf194Q5T5A4 169 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 NKX3-1Q99801 234 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-201ENST00000342245 B3GALT5Q9Y2C3 310 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 EML5Q05BV3 1969 aa16.45■□□□□ 0.22
SMPD1-201ENST00000342245 TRBV23OR9-2A0A075B6M9 112 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 A6NIZ1 184 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 H0YL77 283 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 ISG15P05161 165 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 GIMD1P0DJR0 217 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 HSD11B1P28845 292 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 RAP1BP61224 184 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 GXYLT1Q4G148 440 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 ZNF506Q5JVG8 444 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 CMBLQ96DG6 245 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 ANGPTL4Q9BY76 406 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 NCOR1P1Q9H4R4 102 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 C14orf166Q9Y224 244 aaKnown RBP16.44■□□□□ 0.22
SMPD1-201ENST00000342245 LSM5Q9Y4Y9 91 aaKnown RBP16.44■□□□□ 0.22
SMPD1-201ENST00000342245 KIR2DL5BA0A0G2JN68 375 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 KIR2DL5BA0A0G2JPC4 375 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 ITGB1BP1O14713 200 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 THEGLP0DJG4 465 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 RND3P61587 244 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 HERPUD1Q15011 391 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 KIR2DL5AQ8N109 375 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 TMEM156Q8N614 296 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 TMEM18Q96B42 140 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 FGGYQ96C11 551 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 ZNF558Q96NG5 402 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 GAL3ST2Q9H3Q3 398 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 CBLN4Q9NTU7 201 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 PRR13Q9NZ81 148 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 LRFN1Q9P244 771 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 OSGIN2Q9Y236 505 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 SCN5AQ14524 2016 aa16.44■□□□□ 0.22
SMPD1-201ENST00000342245 NKX2-2O95096 273 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 QRFPP83859 136 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 TMEM176BQ3YBM2 270 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-201ENST00000342245 ARSJQ5FYB0 599 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-201ENST00000342245 ASTLQ6HA08 431 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-201ENST00000342245 ZNF774Q6NX45 483 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 LRRC69Q6ZNQ3 347 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 PARS2Q7L3T8 475 aaKnown RBP16.43■□□□□ 0.22
SMPD1-201ENST00000342245 RBMXL1Q96E39 390 aaKnown RBP16.43■□□□□ 0.22
SMPD1-201ENST00000342245 MRGPRX4Q96LA9 322 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 CTDSP1Q9GZU7 261 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 WSB1Q9Y6I7 421 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 CYB5R3P00387 301 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-201ENST00000342245 TIMP1P01033 207 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 CST2P09228 141 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms