RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 HCFC2Q9Y5Z7 792 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 CCDC187A0A096LP49 1063 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 LOC107986453A0A1B0GWG9 222 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 MED19A0JLT2 244 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 FIGNL2A6NMB9 653 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 HIDE1A8MVS5 230 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 C9J4A7 227 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 BPNT1O95861 308 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 ISG15P05161 165 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 SPARCP09486 303 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 P2RY2P41231 377 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 APOBEC1P41238 236 aaKnown RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 NKX6-1P78426 367 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 ENPP2Q13822 863 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 USF2Q15853 346 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 PLAC9Q5JTB6 97 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 PLPP4Q5VZY2 271 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 LILRA6Q6PI73 481 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF664Q8N3J9 261 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 TMEM156Q8N614 296 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 KREMEN2Q8NCW0 462 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 FRZBQ92765 325 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BLQ99880 126 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 NUDT16L1Q9BRJ7 211 aaKnown RBP8.34□□□□□ -1.07
NECAP1-201ENST00000339754 SMDT1Q9H4I9 107 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 G6PC2Q9NQR9 355 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 TUBD1Q9UJT1 453 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 OSGIN2Q9Y236 505 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 EMC9Q9Y3B6 208 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 URGCP-MRPS24S4R325 110 aa8.34□□□□□ -1.07
NECAP1-201ENST00000339754 A0A0A6YYD4 124 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 PRRT4C9JH25 899 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 HSD17B6O14756 317 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 PHOX2AO14813 284 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 CYB5BO43169 146 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 COL4A2P08572 1712 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 CXCR1P25024 350 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 CCL20P78556 96 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 TNFRSF9Q07011 255 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 PTPRSQ13332 1948 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 HAGHQ16775 308 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 HNRNPA1L2Q32P51 320 aaKnown RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 C1QL3Q5VWW1 255 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 GGNBP1Q5YKI7 109 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 KCTD18Q6PI47 426 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 NPSR1Q6W5P4 371 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 BADQ92934 168 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 SPACA7Q96KW9 195 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 SCGB3A2Q96PL1 93 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 OR11A1Q9GZK7 315 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 SLC25A31Q9H0C2 315 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 SH3BGRL3Q9H299 93 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 NELFAQ9H3P2 528 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 Q9N2J8 555 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 KCNIP3Q9Y2W7 256 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 STRAPQ9Y3F4 350 aaKnown RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 INSL6Q9Y581 213 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 ARID1AO14497 2285 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 LOC101059948A0A1B0GTJ6 334 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 TLCD2A6NGC4 264 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 TMEM14DPA8MWL7 114 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 HRKO00198 91 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 GZMBP10144 247 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 PNMTP11086 282 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 HSD11B1P28845 292 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 JOSD1Q15040 202 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 ZNF77Q15935 545 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 WBP2NLQ6ICG8 309 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 APCDD1LQ8NCL9 501 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 MFSD8Q8NHS3 518 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 TAAR8Q969N4 342 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 FGGYQ96C11 551 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 POM121Q96HA1 1249 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 NOL4LQ96MY1 436 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 VSTM2LQ96N03 204 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 CCNL2Q96S94 520 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 CDCA3Q99618 268 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 ATG101Q9BSB4 218 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 G6PC3Q9BUM1 346 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 LPAR5Q9H1C0 372 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 PLEKHA2Q9HB19 425 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 CRLF2Q9HC73 371 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 FBLN5Q9UBX5 448 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 R4GMQ9 66 aa8.33□□□□□ -1.08
NECAP1-201ENST00000339754 KIAA0100Q14667 2235 aaKnown RBP8.33□□□□□ -1.08
NECAP1-201ENST00000339754 IGLV1-36A0A0B4J1U3 117 aa8.32□□□□□ -1.08
NECAP1-201ENST00000339754 A0A1B0GV50 99 aa8.32□□□□□ -1.08
NECAP1-201ENST00000339754 RAD51DO75771 328 aa8.32□□□□□ -1.08
NECAP1-201ENST00000339754 SCGNO76038 276 aa8.32□□□□□ -1.08
NECAP1-201ENST00000339754 PRH1P02810 166 aa8.32□□□□□ -1.08
NECAP1-201ENST00000339754 MYOGP15173 224 aa8.32□□□□□ -1.08
NECAP1-201ENST00000339754 CTNNB1P35222 781 aa8.32□□□□□ -1.08
NECAP1-201ENST00000339754 P2RY1P47900 373 aa8.32□□□□□ -1.08
NECAP1-201ENST00000339754 DHPSP49366 369 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-201ENST00000339754 ZP2Q05996 745 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms