RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CHST6Q9GZX3 395 aa6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 C20orf85Q9H1P6 137 aa6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 OR51B6Q9H340 312 aa6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 MOB1AQ9H8S9 216 aa6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 NPAP1Q9NZP6 1156 aa6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF629Q9UEG4 869 aaPredicted RBP6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 KLK13Q9UKR3 277 aa6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 TIMM10BQ9Y5J6 103 aa6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 NBASA2RRP1 2371 aa6.44□□□□□ -1.38
SRFBP1-201ENST00000339397 IGKV1-27A0A075B6S5 117 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 A0A0U1RQV5 110 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 LINC01387J3KSC0 135 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ARPC1BO15143 372 aaKnown RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ANGPTL7O43827 346 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 MPIG6BO95866 241 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 NGFP01138 241 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 H2AFB2P0C5Z0 115 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 FCGR2AP12318 317 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 GTF2F2P13984 249 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 EDN3P14138 238 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 PSMB1P20618 241 aaKnown RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 RAD52P43351 418 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 TMEM50BP56557 158 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 RRAS2P62070 204 aaPredicted RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 HLXQ14774 488 aaPredicted RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 RAB35Q15286 201 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 TSC22D1Q15714 1073 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 CDNFQ49AH0 187 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 Q5BKY6 102 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 PLAC9Q5JTB6 97 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 NKAIN3Q8N8D7 197 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 OR52B4Q8NGK2 314 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 GPX8Q8TED1 209 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 SPTSSAQ969W0 71 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 DACT3Q96B18 629 aaPredicted RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 TMEM45BQ96B21 275 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 TAAR6Q96RI8 345 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 SEC22CQ9BRL7 303 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 TINAGL1Q9GZM7 467 aaPredicted RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 BCO1Q9HAY6 547 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 MRPS28Q9Y2Q9 187 aaKnown RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 V9GYS6 101 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 CADP27708 2225 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ARID1AO14497 2285 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 TMEM14DPA8MWL7 114 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 PYCARD-AS1I3L0S3 204 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 SPRY1O43609 319 aaPredicted RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 IL18BPO95998 194 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 CD79AP11912 226 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF24P17028 368 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 RCVRNP35243 200 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 MNDAP41218 407 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 SCAND1P57086 179 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 UBE2MP61081 183 aaKnown RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF260Q3ZCT1 412 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 BTN2A1Q7KYR7 527 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 CHMP1BQ7LBR1 199 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 CD163Q86VB7 1156 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF584Q8IVC4 421 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 TMEM178AQ8NBL3 297 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 APH1AQ96BI3 265 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 LPAR5Q9H1C0 372 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 UPB1Q9UBR1 384 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ICE1Q9Y2F5 2266 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 SPTA1P02549 2419 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ARHGAP21Q5T5U3 1957 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 FAM230AA0A1W2PPH8 454 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 C5orf49A4QMS7 147 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 KLK10O43240 276 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 TMEM127O75204 238 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 CRTAPO75718 401 aaPredicted RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 RAD51DO75771 328 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 FAM3AP98173 230 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 IFITM2Q01629 132 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 SCRN3Q0VDG4 424 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 PDCD1Q15116 288 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 SF3B4Q15427 424 aaKnown RBP eCLIP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 NKPD1Q17RQ9 610 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 MYPOPQ86VE0 399 aaPredicted RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF100Q8IYN0 542 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 ZBTB8BQ8NAP8 495 aaPredicted RBP6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 CAPSLQ8WWF8 208 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 UQCC2Q9BRT2 126 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 RAB22AQ9UL26 194 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 NUBP2Q9Y5Y2 271 aa6.43□□□□□ -1.38
SRFBP1-201ENST00000339397 NCOR2Q9Y618 2525 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 ATRXP46100 2492 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 SLC22A20A6NK97 555 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 ACTL6AO96019 429 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 SERPINA2P20848 420 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 AGTR1P30556 359 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 PTGFRP43088 359 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 BTG1P62324 171 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 RAB1AP62820 205 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 ECH1Q13011 328 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 KRTAP27-1Q3LI81 207 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 ZFP69Q49AA0 526 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 C4orf46Q504U0 113 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 HACD4Q5VWC8 232 aa6.42□□□□□ -1.38
SRFBP1-201ENST00000339397 BRICD5Q6PL45 260 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms