RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SSX3Q99909 188 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 HOPXQ9BPY8 73 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-202ENST00000338325 KCTD14Q9BQ13 255 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-202ENST00000338325 DNTTIP1Q9H147 329 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 METTL8Q9H825 291 aaKnown RBP9.38□□□□□ -0.91
CSMD2-202ENST00000338325 NECAP2Q9NVZ3 263 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 MAB21L2Q9Y586 359 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 N6AMT1Q9Y5N5 214 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 NBEAL2Q6ZNJ1 2754 aa9.38□□□□□ -0.91
CSMD2-202ENST00000338325 TVP23AA6NH52 213 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 TBX1O43435 398 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 LRRC75BQ2VPJ9 315 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 SLC35F1Q5T1Q4 408 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 PGBD2Q6P3X8 592 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 LYPD4Q6UWN0 246 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 SLC16A9Q7RTY1 509 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 OR4S1Q8NGB4 309 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 OR5T2Q8NGG2 359 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 OR51G2Q8NGK0 314 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 OR9Q1Q8NGQ5 310 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 RP9Q8TA86 221 aaKnown RBP9.37□□□□□ -0.91
CSMD2-202ENST00000338325 SLAMF6Q96DU3 332 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 FAM234AQ9H0X4 552 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 TLNRD1Q9H1K6 362 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 RAB18Q9NP72 206 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 AURKAIP1Q9NWT8 199 aaPredicted RBP9.37□□□□□ -0.91
CSMD2-202ENST00000338325 HAO2Q9NYQ3 351 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 COMMD3-BMI1R4GMX3 469 aa9.37□□□□□ -0.91
CSMD2-202ENST00000338325 A0A1W2PQ09 198 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 ZNF878C9JN71 531 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 CDIPTO14735 213 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 GADD45GO95257 159 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 SPARCP09486 303 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 VSIG10L2P0DP72 767 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 SMIM11AP58511 58 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 FAM3AP98173 230 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 SPIBQ01892 262 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 BLMHQ13867 455 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 TIGD6Q17RP2 521 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 CGB2Q6NT52 195 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 C8orf82Q6P1X6 216 aaPredicted RBP9.36□□□□□ -0.91
CSMD2-202ENST00000338325 CRIP3Q6Q6R5 217 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 FAM86B1Q8N7N1 296 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 OR10Z1Q8NGY1 313 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 OR2T4Q8NH00 348 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 C17orf50Q8WW18 174 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 SGCDQ92629 289 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 RORBQ92753 470 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 MED30Q96HR3 178 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 REEP6Q96HR9 211 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 GAFA1Q96PS6 74 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 RAB3IPQ96QF0 476 aaPredicted RBP9.36□□□□□ -0.91
CSMD2-202ENST00000338325 CENPMQ9NSP4 180 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 FGFR1OP2Q9NVK5 253 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 SLC25A10Q9UBX3 287 aaPredicted RBP9.36□□□□□ -0.91
CSMD2-202ENST00000338325 ZNF391Q9UJN7 358 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 SAMD4AQ9UPU9 718 aaKnown RBP9.36□□□□□ -0.91
CSMD2-202ENST00000338325 SF3B6Q9Y3B4 125 aaKnown RBP9.36□□□□□ -0.91
CSMD2-202ENST00000338325 hCG_38984A0A1B0GV85 526 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 NDUFAB1O14561 156 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 COX4I1P13073 169 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 GNALP38405 381 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 IFNGR2P38484 337 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 GSSP48637 474 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 CX3CR1P49238 355 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 ENTPD1P49961 510 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 CAV3P56539 151 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 GMFBP60983 142 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 AANATQ16613 207 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 DGUOKQ16854 277 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 NSUN5P1Q3KNT7 163 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 HCP5Q6MZN7 132 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 ZNF788Q6ZQV5 615 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 LIAT1Q6ZQX7 453 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 LYG1Q8N1E2 194 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 DTX3Q8N9I9 347 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 CYB561A3Q8NBI2 242 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 ZNRF4Q8WWF5 429 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 ITPKCQ96DU7 683 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 DDOQ99489 341 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 MICU1Q9BPX6 476 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 PAPOLGQ9BWT3 736 aaKnown RBP9.36□□□□□ -0.91
CSMD2-202ENST00000338325 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 MEGF9Q9H1U4 602 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 WDR13Q9H1Z4 485 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 PPP1R3EQ9H7J1 279 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 SNTG1Q9NSN8 517 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 DCAF13Q9NV06 445 aaKnown RBP9.36□□□□□ -0.91
CSMD2-202ENST00000338325 CD300AQ9UGN4 299 aa9.36□□□□□ -0.91
CSMD2-202ENST00000338325 ANXA2P2A6NMY6 339 aa9.35□□□□□ -0.91
CSMD2-202ENST00000338325 ANGPTL7O43827 346 aa9.35□□□□□ -0.91
CSMD2-202ENST00000338325 FBXO24O75426 580 aa9.35□□□□□ -0.91
CSMD2-202ENST00000338325 TFF1P04155 84 aa9.35□□□□□ -0.91
CSMD2-202ENST00000338325 ANXA2P07355 339 aaKnown RBP9.35□□□□□ -0.91
CSMD2-202ENST00000338325 NDUFB7P17568 137 aa9.35□□□□□ -0.91
CSMD2-202ENST00000338325 CFL1P23528 166 aaKnown RBP9.35□□□□□ -0.91
CSMD2-202ENST00000338325 POU1F1P28069 291 aa9.35□□□□□ -0.91
CSMD2-202ENST00000338325 GRB2P62993 217 aaKnown RBP9.35□□□□□ -0.91
CSMD2-202ENST00000338325 MXRA7P84157 204 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms