RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 GNALP38405 381 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 MAGEB1P43366 347 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PTH2RP49190 550 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 AKAP6Q13023 2319 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 DEFB113Q30KQ7 82 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PCGF3Q3KNV8 242 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZBTB37Q5TC79 503 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 TSPAN14Q8NG11 270 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR10AD1Q8NGE0 317 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR51A4Q8NGJ6 313 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR13C3Q8NGS6 347 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PIGCQ92535 297 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 UFD1Q92890 307 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 DVL3Q92997 716 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 MBD6Q96DN6 1003 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 ELMOD3Q96FG2 381 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PERPQ96FX8 193 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PGLYRP3Q96LB9 341 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 DIRC2Q96SL1 478 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 MGLLQ99685 303 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 ADAT1Q9BUB4 502 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PAPOLGQ9BWT3 736 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 SLC22A4Q9H015 551 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PPP1R3EQ9H7J1 279 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 PLEKHA1Q9HB21 404 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 ISYNA1Q9NPH2 558 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF701Q9NV72 531 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 ENPP5Q9UJA9 477 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF281Q9Y2X9 895 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 NOP16Q9Y3C1 178 aaKnown RBP11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 TACC2O95359 2948 aa11.98□□□□□ -0.49
APOBEC3B-202ENST00000335760 ABCA12Q86UK0 2595 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 A0A087WXM4 84 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 A0A1B0GWJ7 208 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 DHRS7CA6NNS2 312 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF850A8MQ14 1090 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 GMDSO60547 372 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 CD1AP06126 327 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 PAX1P15863 534 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 TNFSF4P23510 183 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 CCL8P80075 99 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 TNFAIP6P98066 277 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 MLLT11Q13015 90 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 PRDX4Q13162 271 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 UBE2UQ5VVX9 321 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 GPR148Q8TDV2 347 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 TSEN15Q8WW01 171 aaKnown RBP11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 NEU4Q8WWR8 484 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 RGP1Q92546 391 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 FGGYQ96C11 551 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 OPALINQ96PE5 141 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 GSX2Q9BZM3 304 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 DECR2Q9NUI1 292 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 NKIRAS2Q9NYR9 191 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 DHDHQ9UQ10 334 aa11.97□□□□□ -0.49
APOBEC3B-202ENST00000335760 F5H5P2 479 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 F12P00748 615 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 IGHV4-39P01824 125 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 CD55P08174 381 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 ADH4P08319 380 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF20P17024 532 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 SOX2P48431 317 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 EFNA4P52798 201 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 ATP5J2P56134 94 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 TPBGQ13641 420 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 ARMCX4Q5H9R4 360 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 FAM209AQ5JX71 171 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 CLVS2Q5SYC1 327 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 LIPKQ5VXJ0 399 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 KCTD8Q6ZWB6 473 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 MOB3CQ70IA8 216 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 KRT74Q7RTS7 529 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZDHHC23Q8IYP9 409 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR13C5Q8NGS8 318 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR8S1Q8NH09 359 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 FCGR1BQ92637 280 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 ADAT3Q96EY9 351 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 EGLN1Q9GZT9 426 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF275Q9NSD4 429 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 MPC1Q9Y5U8 109 aa11.96□□□□□ -0.49
APOBEC3B-202ENST00000335760 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 ANXA2P2A6NMY6 339 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 NCR1O76036 304 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 LY6HO94772 140 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 INMTO95050 263 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 NRASP01111 189 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 HPXP02790 462 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 CPEP16870 476 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 PSMB9P28065 219 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 SRP9P49458 86 aaKnown RBP11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 RPS11P62280 158 aaKnown RBP eCLIP11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 GPR50Q13585 617 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 NEDD8Q15843 81 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 SPRNQ5BIV9 151 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 YIF1BQ5BJH7 314 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 PLCXD3Q63HM9 321 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 SPERTQ8NA61 448 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 ITLN1Q8WWA0 313 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 C10orf35Q96D05 121 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 HIST1H2AAQ96QV6 131 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms